Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU0008 |
Symbol | |
ID | 2688683 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | + |
Start bp | 14064 |
End bp | 15614 |
Gene Length | 1551 bp |
Protein Length | 516 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637124670 |
Product | sensory box histidine kinase/response regulator |
Protein accession | NP_951070 |
Protein GI | 39995119 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5002] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGGCT ACAAGGTATT CATCGTCGAC GATGAAGCGG ATATCGCCCT CATCCTCAAG CTGCAACTGG AGGATGCCGG CTATCGGACC ATGCGGGCGC GGGACGGGAT CGAGGCCCTG GACGCTCTCG AACGGGAGAG CTTCGACCTG GTATTGCTCG ATATCCGCAT GCCGCGCATG GACGGAATCG AGGTCCTGGA GCGAATCCGG GACCGGTGGC CCGATCTGGT GGTGATCATG ATGACCGCCC ACGGGAGCGA GGACATCGCC GTAGAGGCCA TGAAAAAGGG GGCGGTGGAT TACATCTCCA AGCCCTTTTC CTCCGATGAT ATGAAAAAGC GAGTGGAACG CGCCATCCAG TTCAACCGGA CCAGACTTGA AAACGAGCGG CTGCAACGGG TGCTCGACGA GGAACGGCGG AAGATGGGGG CGATCCTTCG GGGGATGGCG GACCTTCTCG TGGCGGTGGA CCGCGAGGGA AGGATCATCA CCATCAACCG GGCAGCCGAG GAACGCTTCG GCATTGCGGC CGACGGAGTA CAGAATCAGC CGGTGGAGCT ACTCCTGAAA ACAGATATCC CGGGGGAGCG CCTCCCCTGT CGCGTGGTGC TGGCCACCGG CGACCCCTGT CTTGACGTGA CCTATGCCGT GCAGGCGGGC GGTGGCATGA TCCCGGTCCT GTCCAGCGCA ACTCCCCTCA AGGGCGCTGG CGGGGAAATG ATGGGATGCG TGGAAATCAT CAGGGACATC TCCACCCTCA AGGCCCTTGA ACGGGAGCGC GAGGATTTCG TCTCCATGCT CTCCCACGAC TTGAAGACCC CCATCACCGC CGTGGTCGGC TCCATCGACC TGGTGCGGGA GGGGCGGATC GGCCCGGTCA ACGCAGAGCA GCGCTCCTAC CTTGATTCGG CCATGGAAAG CTGTGCCGAG ATGGTGGATA TGATCGACAC GCTGCTCGAC GTCCACAGGT TCGAGGCGGG GAGAATGGTC ATGGCGGCCC GGCTCGAAGA CCTGGGACCG CTCATGGCCC GGACCCTAGG GCGTTTCGAC TCAGTGGCCC GACGGGCGGG CATTGCCCTG GTTCTGACGC TCCCCGACTA TCCTCTGGCC CTGTCGCTGG ACCGCAACCA GTTCGCCAGG CTCATGGGCA ATCTCATTGC CAATGCCATC AAGTTTACCC AAGAGGGGGG AGAGATCGAG GTGAGCGCCC GGCTTCTGAA CGACCCGGCA GAACTTGTGG GCCGCATTCC CCGGGAAAGC TATCCCGATG TGCCGTTGCC GCCGCTGAAC CCTCATCTGC TCATCACGGT GCGGGACACG GGGGTCGGCA TCCCGGCCGA CTCCCTCGTC AGCATCTTCG ATCGCTTTGT CCAGGCCCGC AACCGCAGGT TGGGGAAATC GACCGGCACC GGGCTCGGCC TTGCCTTCTG CCGCAAGGTG ATGGACGCCC ACCACGGCTA TATCTGGGCG GAGAGCGTCG AAGGGGAAGG CAGTTCCTTC AACATGCTGT TCCCTCTCAC GAACGAAGCG TACGCCGCGA CGGGAGGATA A
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Protein sequence | MSGYKVFIVD DEADIALILK LQLEDAGYRT MRARDGIEAL DALERESFDL VLLDIRMPRM DGIEVLERIR DRWPDLVVIM MTAHGSEDIA VEAMKKGAVD YISKPFSSDD MKKRVERAIQ FNRTRLENER LQRVLDEERR KMGAILRGMA DLLVAVDREG RIITINRAAE ERFGIAADGV QNQPVELLLK TDIPGERLPC RVVLATGDPC LDVTYAVQAG GGMIPVLSSA TPLKGAGGEM MGCVEIIRDI STLKALERER EDFVSMLSHD LKTPITAVVG SIDLVREGRI GPVNAEQRSY LDSAMESCAE MVDMIDTLLD VHRFEAGRMV MAARLEDLGP LMARTLGRFD SVARRAGIAL VLTLPDYPLA LSLDRNQFAR LMGNLIANAI KFTQEGGEIE VSARLLNDPA ELVGRIPRES YPDVPLPPLN PHLLITVRDT GVGIPADSLV SIFDRFVQAR NRRLGKSTGT GLGLAFCRKV MDAHHGYIWA ESVEGEGSSF NMLFPLTNEA YAATGG
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