| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_3964 |
|---|
| Symbol | |
|---|
| ID | 8139338 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | - |
|---|
| Start bp | 4546432 |
|---|
| End bp | 4548039 |
|---|
| Gene Length | 1608 bp |
|---|
| Protein Length | 535 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644871580 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_003023738 |
|---|
| Protein GI | 253702549 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.00000000000408371 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTCCACCA TCAGGTCCAA GATCATACTC AACCTCGTCG TTTTGTTGCT CACCATTGTC
GGGATCGTCG CCTTCGAGTA CAGCAACATA GCAAAGCTTG GCCGGCTTCA GGATGAGGGG
GCGAAACGCT CCAAAGACGC GGTCCTGGCC AAGGAGGCCT CCATGGGGGG GCTCGCGCTG
TACCGGATCA TCGCCGACGC GCAGATAAAC CGGGATCTCG ATGAGACGGC GAAGATTTGG
AACCCGACCA AAACAGAGGT CTTGGCGAAT ATCGCTTTTG TAGAGGCGTC GGCAGATACG
GCGGAGGAGA AGAAGATAAC CGCCGAGGTC AAGGCCGCTC TCAACGATGT GGTGAACCTG
TTCGAGGGGA AGATGCTTCC TCTTCTGAAG ACGACCGACG GCGTCACGCC GGAGCTGAGC
GCGCTGGATG CCCAAATCGA CGAAAAGGTC GTGTTGGTCG AGGCGGGGGT CGACAAGGTG
GTCGCTTCAA TGCAAAAGGA GATGGACGTG GCCGACGGGG AGTTCGACGC TGACCGCAGG
ATGGCGATAG TGGTAGCGGT GGTGGTCGGA GCCGCCGGCC TGTTGCTGCT GCTGGTGGTG
GGGCTCTTGT TGCTTAGGAG CATCATGCGT TCCATCGATG CCATGAGAGT CGTCATGACC
GCGGTGCACG AGGGGGATCT GACCAGGCGG GTGGAGATCG ACAGCAAGGA CGAACTCGGC
ATCATGAGCC GGGAGTTCAA CGGGATCATC GGGAGACTGC AAGAGATGAT CAACCATATT
TCCGATACCT CCAACCAGGT CGTGGCCGCT TCCGCCCAAC TGAGCGCGAC TGCGGAAAGG
ATCGCCAACG GCGCGGAGGA GGTCGCGGCG CAATCCTCGA CCGTCGCCAC CGCGGGTGAG
GAGATGTCGG CGACCTCCGG GGACATAGCT CTCACCTGCC AGAAGGCTTC CGACGGGGCG
AAGCTTGCCG CCGAATCGGC CGGCGGCGGC GCGAGCCTGG TGGAGAGAAC CGTTTCCGTC
ATGGGCGAGA TCGCCGCCAA GGTCCAGGAA TCGGCCCGGA CGGTGGAAAC CCTGGGCGAA
CGCAGCGATC AGATCGGCGC CATCATCGTC ACCATCGAGG ACATCGCGGA CCAGACCAAC
CTCCTGGCGC TGAACGCAGC CATCGAGGCG GCCCGTGCGG GCGAACAGGG GCGGGGCTTC
GCGGTGGTGG CGGACGAGGT GCGCGCCCTC GCCGAGCGCA CGACCCGGGC CACCAGGGAG
ATCGACGAGA TGATCAAGGC GATCCAGAGG GAGACCAAGG GGGCCGTGGC AGCCATGGAG
CAGGGGGTCG GGCAGGTGGA GGCGGGAACC AGGGAGGCGG CCAAGTCAGG CGACGCCCTG
CGCGAAATCC TGGAGCAGGT GCACGACGTC GCCATGCAGG TGAACCAGAT CGCTACCGCC
GCCGAAGAGC AGACCGCCAC CACCAGCGAA ATTTCCAGCA GCATGCAGCA GATATCCCAG
GTCGTGCGGG ACACCGCCTC GGGAGCCCAC CAATCCGCGG CGGCGGCGCA CGAGCTGAAC
GGGACCGCCG AGCAGTTGCA AAGGCTGGTG CGGCAGTTCA GGCTCTGA
|
|---|
| Protein sequence | MSTIRSKIIL NLVVLLLTIV GIVAFEYSNI AKLGRLQDEG AKRSKDAVLA KEASMGGLAL
YRIIADAQIN RDLDETAKIW NPTKTEVLAN IAFVEASADT AEEKKITAEV KAALNDVVNL
FEGKMLPLLK TTDGVTPELS ALDAQIDEKV VLVEAGVDKV VASMQKEMDV ADGEFDADRR
MAIVVAVVVG AAGLLLLLVV GLLLLRSIMR SIDAMRVVMT AVHEGDLTRR VEIDSKDELG
IMSREFNGII GRLQEMINHI SDTSNQVVAA SAQLSATAER IANGAEEVAA QSSTVATAGE
EMSATSGDIA LTCQKASDGA KLAAESAGGG ASLVERTVSV MGEIAAKVQE SARTVETLGE
RSDQIGAIIV TIEDIADQTN LLALNAAIEA ARAGEQGRGF AVVADEVRAL AERTTRATRE
IDEMIKAIQR ETKGAVAAME QGVGQVEAGT REAAKSGDAL REILEQVHDV AMQVNQIATA
AEEQTATTSE ISSSMQQISQ VVRDTASGAH QSAAAAHELN GTAEQLQRLV RQFRL
|
|---|
| |