Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_3906 |
Symbol | |
ID | 8139280 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | - |
Start bp | 4494318 |
End bp | 4495103 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644871523 |
Product | flagellar biosynthetic protein FliR |
Protein accession | YP_003023681 |
Protein GI | 253702492 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 0.00325261 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGTTCCAGA ACCTCCCCCT GACATCGCTC GCCGACCTGA TCCCGCTGGC CCTGGTCCTG GCGCGGGTGG CGGGGCTCTT CTCGGCGATC CCCATGTTCG GGGCGAGGCT CGTCCCCGCC CGGGTCAAGA TGGGGCTCAT CTTCGCCATG ACCCTCCTCA TCTTCCCCGT CATCAAGCCC CATGCCGTCC CCAACGTCTC CGACTCGCTG GGGCTCATGC TCCTCGTGCT GCAGGAGGCC CTGGTCGGGC TCACCCTGGG GGCCGTGTCG CAGTTCATCT TCGCCGCGGT CGAGTTCTGC GGGCAACTCG TCGGGACCCA GATGGGGATC AGCATGGCGG CCCAGTTCGA CCCCGCCACC CAGAACAACG TCCCCACCAT GGCGATCTTC CAGGGGGCGC TCGCCACCCT GCTTTTCCTC GCCTTCAACG TGCACGAGCA CTTCATCCGC GGCATCGTGG ACAGCTACCG GGTGATTCCC CTCGGCGCCT GGCACGTGAG CGGCGGGCTG ATGAAGTTCT TCATCGAGAC CAGCACAGGG ATCTTCATCA TCGGCATCAA GCTCGCGGCG CCGGTGTCGG TGGCGCTTCT GGCCACCAGC GTCGCCCTGG GGATCGTCGC CCGCAGCTTC CCCGCCATGA ACGTCTTCAT GGTGAGCATG CCCCTCAGCA TCGGGATCGG CTTCGTCATC CTCGGGATCT CCCTTCCCGT TTTCGTGCGG GTGCTGCAGG GAAGTTTCGG GCAGGTGGTG GATCAGATGA GGACCCTCTT CAGGCTCCTG GCCTAG
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Protein sequence | MFQNLPLTSL ADLIPLALVL ARVAGLFSAI PMFGARLVPA RVKMGLIFAM TLLIFPVIKP HAVPNVSDSL GLMLLVLQEA LVGLTLGAVS QFIFAAVEFC GQLVGTQMGI SMAAQFDPAT QNNVPTMAIF QGALATLLFL AFNVHEHFIR GIVDSYRVIP LGAWHVSGGL MKFFIETSTG IFIIGIKLAA PVSVALLATS VALGIVARSF PAMNVFMVSM PLSIGIGFVI LGISLPVFVR VLQGSFGQVV DQMRTLFRLL A
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