| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_3814 |
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| Symbol | |
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| ID | 8139188 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | + |
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| Start bp | 4385029 |
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| End bp | 4386876 |
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| Gene Length | 1848 bp |
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| Protein Length | 615 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644871433 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_003023591 |
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| Protein GI | 253702402 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4235] Cytochrome c biogenesis factor |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 97 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAGC TAGTAACCCG TCCCAGCGGC GCTGTCGCGG TCCTGCAAGA AGGGGCGCTT
CTTTCCGCCA TCCTGATCAC CAGCAACAGG GAATCGCACC TCAGGGAATG CCTGTGCGAA
CTGATGCAGC AGAGCATCTC CGACCGCATG GAGGTGATCG TGGTCGATCA GGGGTCGGAG
CAGTGCGAAT GGGCCGTGGT GGCCGACCTG CAGAAGATCC ACCCGAACCT GATCTCCCTG
AAGCTTCCGG CGGCCGCCGG CGGCAAGGGG GTCGAGATGG CGCTCAGAAT CGCCTCGGGC
AAGTACGCGA CACTTTTGGA GGCGACCGAC CGCTTGAAGC GCGACGCCTA TGGACTCTTG
ACCGCGGCCC TGGAGGGAAA CCCCGCCGCG ATGCTCGCCT ACGGCGACAC CTGCTTCACC
GCCATCCCCC ACGAGAGCTT CGCCAGCCAC ACGAGCTACG GCAAGGTGAT CTGGCCCGAT
TACACCCCCC AGCAGCTGGC CCAGCTCTCC GAGGTGGCCC CGCACCCGGT CTGGCGCAGG
GAACTGCACG ACAGCGTCGG TTTCCCGCCG CAGGGGTGCC CGAACCACGG GGTGCGCGAG
TTCATGCTCA AGGTGGTGGA GCGCTTCCGC ATCCTGCACC TGGAGGAGTT CACCGGCCTC
AAGCTGATCA CCGCAAACCA GGCGCCGGTC CAGGCGGCTC AACCGCAGGC GCGCCCCGAG
CCCGCCCCGG CGGTCCATCG CGCTCCCGAG CAGGAACCCG CCCCCCCCGC CACCCCCGTC
AGCTTCGAAC AGCCGAGCGC GCCCGCAGCA CCGGTTTACA GCCAGAGCGC GCCGGCGCCC
TCGGTCCAAG CCGTGCCGCG GCAGAAAACG GCGAACTCCG AACTGAAAGG GGCGGACCAG
GTGTACCAGG AACTGCGCCC CATCGTCACA GGAGAAGACC CGCAGCGGGC CGCGGCGGCG
CTCCGTGAGC ACCTGGCGCG TTTTCCCAAG CACGCCGTGG CCCACAACGA CCTGGCAGCC
ATCAGCTATC AACTGGGCGA AAAGGAACAG GCGCTCAAGC ATTACCGCGA GGCGGTCTGG
CTCGATCCTA AAGAAAACGT CTACCTGAAG AACCTGGCCG ACATCCTTTT CGTCGAGGCG
GGAGAGGCCG ACGAGGCGAT AGCGATCTAT CTGAGGCTCC TGGAGCAGTC GCCGCGCGAC
GTCGAGACCC TGCTGAACCT CGGGATCATC TGCGAGAGCG TGGGGCAGCC CGCCGAGGCC
GAATCCTTCT ACCAGAGGGC GCTGGAGATC GAGCCTTGGA ACCAGGCCGC ACGGCAGCAA
CTGACCGCGC TGCGCCAGAG GACGGAAGAG CCCCAGCCCC CGGCTGCAAA AGACGAGGAT
CTCGCCGCAG AGGATCGGTA CCAGAGGTCC CAGGAACTGG TCTCCCAGGG GGACCTGGAC
GGGGCGTTCC AGGAACTGAA AGAAATCCTC CTCTCTTACC CCGACTTTGC CCCCGCGCAC
AACGACCTGG CCGTTTTGGC CTACCAGCAG GGGGACAAGG AGCAGGCGCG CGCGCACTAC
GAGAAGGCGG CGGAGCTTGC GCCTGGAAAC GGCACCTTCC AGAAGAACCT GGCCGACTTC
TACTTCGTCG AAGGGTACGA CGTCGACGGG GCCATCGCGA TCTACCTGGA ACAGCTCCGC
AGGGAGCCCA AGAACATCGA GACGCTGATG GGGCTTGGGA AGATCTGCAC CATACTGGAC
CGCCCGGTAG AGGCGCAGAG CTTCTACGGC AAGGTGATCA ACCTGGAGCC GTGGAACCGC
GACGCCCGCG AATGCCTCAA CAGCCTGAAG GAGGTGGCGA ACGGCTGA
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| Protein sequence | MSQLVTRPSG AVAVLQEGAL LSAILITSNR ESHLRECLCE LMQQSISDRM EVIVVDQGSE
QCEWAVVADL QKIHPNLISL KLPAAAGGKG VEMALRIASG KYATLLEATD RLKRDAYGLL
TAALEGNPAA MLAYGDTCFT AIPHESFASH TSYGKVIWPD YTPQQLAQLS EVAPHPVWRR
ELHDSVGFPP QGCPNHGVRE FMLKVVERFR ILHLEEFTGL KLITANQAPV QAAQPQARPE
PAPAVHRAPE QEPAPPATPV SFEQPSAPAA PVYSQSAPAP SVQAVPRQKT ANSELKGADQ
VYQELRPIVT GEDPQRAAAA LREHLARFPK HAVAHNDLAA ISYQLGEKEQ ALKHYREAVW
LDPKENVYLK NLADILFVEA GEADEAIAIY LRLLEQSPRD VETLLNLGII CESVGQPAEA
ESFYQRALEI EPWNQAARQQ LTALRQRTEE PQPPAAKDED LAAEDRYQRS QELVSQGDLD
GAFQELKEIL LSYPDFAPAH NDLAVLAYQQ GDKEQARAHY EKAAELAPGN GTFQKNLADF
YFVEGYDVDG AIAIYLEQLR REPKNIETLM GLGKICTILD RPVEAQSFYG KVINLEPWNR
DARECLNSLK EVANG
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