| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_3708 |
|---|
| Symbol | |
|---|
| ID | 8139082 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | + |
|---|
| Start bp | 4273775 |
|---|
| End bp | 4274830 |
|---|
| Gene Length | 1056 bp |
|---|
| Protein Length | 351 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 644871328 |
|---|
| Product | thioesterase superfamily protein |
|---|
| Protein accession | YP_003023486 |
|---|
| Protein GI | 253702297 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1607] Acyl-CoA hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 79 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGATG AAACGACCAA AAATGAGGTG CTCCAACTGA CGCCGCACGA CACCCGATAC
CTGTTCGTGC TCCCTTTCTC GACGGACCCG GCGCTGGCAC GGCGCTTTCT GGCACGAGAC
CGCCAGATGC CGGGCAATAT CCGGTTTGGG AAACTTCTCG AGGTGCTGGA CAAGGTGGCC
GAGAACACCG CGCTCGGGTA CGTGAACCAG TTCTATCCCG ACGCGCGGGT GGTGACCGCG
GCCATCGACA ACATCGTGGT ACGAAACCCC GCGGACACCA CGCACGACCT GGTATTTTCA
GCGCAGATAA ACCATGTGGG GAAATCGTCC ATGGAGGTGG GGATCAGGGT GGAATGTTTG
GGGACCTGTT CAAACCACCT GGCGAGCTGC TACTTCACCA TGGTCGCCCG TTCGGCGGAC
AGCAACGAGG CAAAGAGCCT CGCGCTTCCC CCTCTTGAGT ACAGGCAGCA GATAGAGCAG
AAAAGACACC ACAAGGCGGA ACAGCGCCGC CAGGCGTACC GAGAGAGCCT GGCCAAAGCC
GAGGAAATGC CTTCGCTCGA GGAGTACCTC TTCCTGAAGA AGCTGCATAA GGAGCAGGAA
GCTCCAGACT TCGACGGCAT ACGCGCGGGG CAGCTGGCAC TGGAGTCAAC GGTCCGCGCC
TACCCGGAGC AGGAGAACGT GCCAAAGACG ATCTTCGGGG GATACCTGAT GCGTAAAGCC
TACGAACTGG CCGCGCTCGC AGCCGAGATG GTGACCGACG ACCGTGTGGT TCCCTGCCAG
GTGAACCGGA TCAACTTCAA CCAGCCGGTG CTCCTCGGGG ACCAGTTGAA GTTCACGGCG
CGGGTGGTCT TCACCGGAAA AACCACCATC ACGGTCCAGT CGGACATCCA ACGCTTCGAC
CGCGACGCCC ACAACACCGC GCTTTCCAAT TCATGCCTCT TCACCTTTAG GAACGTCGGC
AGCGAGATGG AACCCAAGCC GGTACCATTC ATCTACCCGG TCACCTACGC GGAAGACGCG
AGATTCCTGA ACGCCTACCG GCAGCGGCTG GATTGA
|
|---|
| Protein sequence | MSDETTKNEV LQLTPHDTRY LFVLPFSTDP ALARRFLARD RQMPGNIRFG KLLEVLDKVA
ENTALGYVNQ FYPDARVVTA AIDNIVVRNP ADTTHDLVFS AQINHVGKSS MEVGIRVECL
GTCSNHLASC YFTMVARSAD SNEAKSLALP PLEYRQQIEQ KRHHKAEQRR QAYRESLAKA
EEMPSLEEYL FLKKLHKEQE APDFDGIRAG QLALESTVRA YPEQENVPKT IFGGYLMRKA
YELAALAAEM VTDDRVVPCQ VNRINFNQPV LLGDQLKFTA RVVFTGKTTI TVQSDIQRFD
RDAHNTALSN SCLFTFRNVG SEMEPKPVPF IYPVTYAEDA RFLNAYRQRL D
|
|---|
| |