Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_3639 |
Symbol | |
ID | 8139013 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | + |
Start bp | 4216920 |
End bp | 4217606 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644871260 |
Product | ABC transporter related |
Protein accession | YP_003023418 |
Protein GI | 253702229 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 157 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCTCAA TTCAGAACGT AGTGAAGACC TTCAACAGCG GGCGACCAAA CGAGTTGTGC GCGGTGCGGG AGGTTTCCCT GGAGATCGGG TTGGATCAGG CCACGGCCCT GGTCGGACCG AGCGGTTCGG GGAAAACGAC GCTCCTCTCC TTGATCGGAT GCATGGCGCG CCCCACATCC GGCCGCATCT TCGTCAAGGG AGAGGAGGTC ACCAGCCTGC CGGAACGGTT TCTTACCAGG ATCCGGAGAT CGACCTTCGG CTTCGTCTTT CAGCGGCACA ATCTGATAAA GGGAATTTCC GTGCTGGAGA ACGTCATGGC GCCTGCTTAC CCTGAGGGGG AGCCTTTCCC GCTGCTTAGG CAAAGGGCTC TCGATACCTT GGAGCGATTG AACCTGAAGC AGCGTGCGGA CGCTAAAGTG GAGTGGCTTT CCGGGGGGGA GGCGCAGAGG GTGGCAATAG CTCGCGCCAT GATCAACCGT CCAGCCGTCA TGATAGCCGA TGAGCCGACG GCGCACCTCG ATACGAAGTT GTCCTACGAC TTCATGTCGC TTATGAAGGA AGTGAAAGAC GCCGGGACCG CGATCATCCT TGCCAGCCAC GACCCCATCG TCCATGGCTG CGACCTGATC GGCCGGGTAG TGGAGCTGCG TGACGGGCGG GTAGTGACCG AGAGGAACCC GAGGTGA
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Protein sequence | MISIQNVVKT FNSGRPNELC AVREVSLEIG LDQATALVGP SGSGKTTLLS LIGCMARPTS GRIFVKGEEV TSLPERFLTR IRRSTFGFVF QRHNLIKGIS VLENVMAPAY PEGEPFPLLR QRALDTLERL NLKQRADAKV EWLSGGEAQR VAIARAMINR PAVMIADEPT AHLDTKLSYD FMSLMKEVKD AGTAIILASH DPIVHGCDLI GRVVELRDGR VVTERNPR
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