Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_3593 |
Symbol | |
ID | 8138966 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | - |
Start bp | 4171635 |
End bp | 4172300 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644871213 |
Product | ribulose-phosphate 3-epimerase |
Protein accession | YP_003023372 |
Protein GI | 253702183 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0036] Pentose-5-phosphate-3-epimerase |
TIGRFAM ID | [TIGR01163] ribulose-phosphate 3-epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 148 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAGA TCGCTCCATC CATTCTTTCC GCAGACTTCG CCCGGCTGGG CGAGGAGATC AAGGCCATCG AGGCCGGCGG CGCCGACTAC GTCCACATCG ACGTCATGGA CGGCCAGTTC GTCCCCAACA TCACCATCGG TCCGCTGATC GTGGAAGCGG CGCGCCGGGT CACCACGCTG CCGCTCGACG TGCACCTGAT GATCGACAAC CCGGACCGCT ACATCCCAGA CTTCGCCAAG GCGGGGTCGG ACATCATCGT GGTCCACGCC GAGGCGACCA ACCACCTGCA CCGTACCGTG CAACTGATCA AGTCGCTCGG GAAGAAGGCG GGCGTCTCGC TGAACCCGGC GACCCCGCTG AACCTTCTGG ATTACGTGAT GGAGGACCTC GACCTGATCC TCCTGATGAC GGTGAACCCC GGTTTCGGCG GGCAGTCGTT CATCGAGGCC TGCATCCCGA AGATCCAGGC CCTGCGCGCC ACCATGGATA GGCGCGGCAT CGAGGCGGAA CTCGAGGTCG ACGGCGGCGT CAAGATCGAC AACATAGCGC GCATCTCCCA TGCCGGGGCG GACGTCTTCG TGGCCGGCAG CGCCGTTTTC AACAGCCCCG ACTACGCGGC GACCATCGCG GAGCTGAAGA AAAAGGCCAA GGAGCCGGTG CTCTGA
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Protein sequence | MKKIAPSILS ADFARLGEEI KAIEAGGADY VHIDVMDGQF VPNITIGPLI VEAARRVTTL PLDVHLMIDN PDRYIPDFAK AGSDIIVVHA EATNHLHRTV QLIKSLGKKA GVSLNPATPL NLLDYVMEDL DLILLMTVNP GFGGQSFIEA CIPKIQALRA TMDRRGIEAE LEVDGGVKID NIARISHAGA DVFVAGSAVF NSPDYAATIA ELKKKAKEPV L
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