Gene GM21_3454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_3454 
Symbol 
ID8138821 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand- 
Start bp3991211 
End bp3991900 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content58% 
IMG OID644871069 
Producturacil-DNA glycosylase 
Protein accessionYP_003023234 
Protein GI253702045 
COG category[L] Replication, recombination and repair 
COG ID[COG0692] Uracil DNA glycosylase 
TIGRFAM ID[TIGR00628] uracil-DNA glycosylase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value0.0594128 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAGAC AGATTCAGAT GGAAGCTGGC TGGAAATCAC ACATGCTGGA GGAATTTCAG 
AAGCTTTACA TGTCTGAGTT GAAGGAGTTC CTGCGCCTTG AGATAGCACG CAAGAAGACC 
ATCTATCCCA AGGGGAGCGA GTACTTCAAC GCCTTCAACT CCACCTCCTT TGACAAAGTG 
AAGGTGGTGG TGCTCGGGCA AGACCCTTAC CACGGTCCGG GCCAAGCCCA CGGGCTTAGC 
TTCTCCGTCC CGCGCGGTGT AGATATTCCG CCTTCGCTGG TGAACATCAT TAAGGAGATC 
CAGAGGGATC TCGTGCTCAC GCAGGAGGAC TTCAGACACG GTCACCTGAA GTCGTGGGCG 
GACCAGGGCG TGCTCCTTTT GAACAGTGTG CTGACGGTCG AGGCTGGACG CGCCGCTTCC 
CACCAGGGGA AGGGATGGGA AATCTTCACC GACCGCGCCG TCTCGATGCT CAACGGCAAG 
AAGAACCACC TCGTATTCAT GCTTTGGGGA GCCTACGCCC AGAGAAAGGG GGGCGTCATC 
GACGACAAGA GGCACCTGGT CCTGAGGGCG CCGCATCCGT CGCCCCTATC CGCTCACCGC 
GGTTTTCTCG GTTGCAGGCA TTTCTCCCAG GCCAACGCCT ACCTGGCACG GCATGGGATG 
GATCCTATAG ATTGGCGTCT CCCCGCCTAG
 
Protein sequence
MERQIQMEAG WKSHMLEEFQ KLYMSELKEF LRLEIARKKT IYPKGSEYFN AFNSTSFDKV 
KVVVLGQDPY HGPGQAHGLS FSVPRGVDIP PSLVNIIKEI QRDLVLTQED FRHGHLKSWA 
DQGVLLLNSV LTVEAGRAAS HQGKGWEIFT DRAVSMLNGK KNHLVFMLWG AYAQRKGGVI 
DDKRHLVLRA PHPSPLSAHR GFLGCRHFSQ ANAYLARHGM DPIDWRLPA