Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_3337 |
Symbol | rplJ |
ID | 8138699 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | - |
Start bp | 3865382 |
End bp | 3865903 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644870950 |
Product | 50S ribosomal protein L10 |
Protein accession | YP_003023120 |
Protein GI | 253701931 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0244] Ribosomal protein L10 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 0.0000271161 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGAATAAGG AAAACAAACA AGAACTTGTT GCCGAGATGC ACGACAAGCT CCAGAGGGCC CAGGCGGTCT TTCTCGCGGA TTTCCGCGGG ATGAACGTCG GCCAGGCCAC CGAGCTCAGA AACGAGCTCA GGAAAGCGAA CGCCGAGTAC AAGGTCGTCA AGAACACCCT GCTCGAGATC GCTTCCAAAG GGACCGACAA GGAAGGGCTC AACCCCTACT ACGCCGGCCC TACGGCTATC GCTCTTTGCT ACGACGATCC TGTCGCAGCG GCCAAGGTGC TGTCCCGCTT CAACAAGGAA AACACCAACC CGTTTACCTT GAAAGCCGGC GTGCTCACCG GCAAGACCAT CAACGTGGCT GACATCCAGG CTCTCGCAGA CCTGCCGAGC CGCGAAGTGC TTATCGCCAA GATGCTGGGC AGCATGCAGG CACCGGCAAG CAACTTCGTA CGCGTGCTGG CAGCGGTCCC GGGCGGCTTT GTACGCGCGC TGGACGCGAT CCGCGCTCAG AAAGAAGCCT AG
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Protein sequence | MNKENKQELV AEMHDKLQRA QAVFLADFRG MNVGQATELR NELRKANAEY KVVKNTLLEI ASKGTDKEGL NPYYAGPTAI ALCYDDPVAA AKVLSRFNKE NTNPFTLKAG VLTGKTINVA DIQALADLPS REVLIAKMLG SMQAPASNFV RVLAAVPGGF VRALDAIRAQ KEA
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