Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_2878 |
Symbol | |
ID | 8138221 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | + |
Start bp | 3349248 |
End bp | 3350117 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644870479 |
Product | protein of unknown function DUF1568 |
Protein accession | YP_003022668 |
Protein GI | 253701479 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1943] Transposase and inactivated derivatives |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 0.000000473385 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGCTCGTC CCCTACGCAT CGAATTTGAC GGAGCAGTGT ATCACGTAAC TTCGCGAGGC AACGAGCGCA AAGACGTATT CCGGGACGAC AAAGACCGCA CAGCGTTTCT AGGTATCCTT ACAAAATGCT GCAACCTTTT CCATTGGGTT TGTCATGCCT ACTGCCTCAT GAATAATCAT TACCACCTCG TTATTGAGAC CCTTGACAGC ACACTTAGCA GAGGAATGCG ACAGCTAAAC GGTGCATATA CCCAGAAGTT CAACTGGAAC CATGACCGCG TTGGGCACCT TTTCCAAGGC CGATACAAGG CCGTGTTGAT CGAGAAGGAA AGTCATCTCC TGGAAGCATG TCGCTATGTC GTGTTAAACC CCATAAGAGC AAAGATGATC ACTGCTCCAC AGCACTGGCA GTGGAGCAGC TATCGAGGAA CATGTGGCTT ATCTACTCCC GCTGCTTGCC TTACTGTAGA ATGGGTCCTT CAGCAGTTCG GCAGTACTCG TCAACTTGCG ATCAGGGAAT ATAAAAAGTT TGTGCAAGAT GGAATAGAAG CTCCATCTCT ATGGGAGGAC CTAAGGTGCC AGATCCTGCT CGGAGATGAG GCCTTCATTG ATAAGTTTAG TGAAGTGGCA AAGGGAGCTG AAGAATTAAG AGAGATCCCT CGCAGTCAAC GATTCCTATC TCGTCCATCG CTCCAGGATT TATTCTTCGA ATTGAACAAC AAGCAGCACC GGAATGAGCT GATCAATGAA GCGGTGCAGG CTCACGGATA TTCGCAAAAA GAAGTTGCGG ATCATCTCAG GCTGCACTAC GCCACAATTA GTCGAATCTT AGCCAAGAAC AACGGGAAAA CATCAAGAAG CAAGACCTGA
|
Protein sequence | MARPLRIEFD GAVYHVTSRG NERKDVFRDD KDRTAFLGIL TKCCNLFHWV CHAYCLMNNH YHLVIETLDS TLSRGMRQLN GAYTQKFNWN HDRVGHLFQG RYKAVLIEKE SHLLEACRYV VLNPIRAKMI TAPQHWQWSS YRGTCGLSTP AACLTVEWVL QQFGSTRQLA IREYKKFVQD GIEAPSLWED LRCQILLGDE AFIDKFSEVA KGAEELREIP RSQRFLSRPS LQDLFFELNN KQHRNELINE AVQAHGYSQK EVADHLRLHY ATISRILAKN NGKTSRSKT
|
| |