Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_2855 |
Symbol | |
ID | 8138198 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | + |
Start bp | 3321829 |
End bp | 3323577 |
Gene Length | 1749 bp |
Protein Length | 582 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644870456 |
Product | sigma54 specific transcriptional regulator, Fis family |
Protein accession | YP_003022645 |
Protein GI | 253701456 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 154 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAGT CGCAGAAAAA GAAGAACATC TCCGGCGAGG CGACGAAGAA CAAGGTGCGC TCCCTGGTCC ATTTCTGCTC CGACACCGGC AATATCTGGC TGCACGAGCA CCGCATGCTG CTGATTCACG CGGAGGCGCA AGGGGCGATG CGCCGGGAAC TGATCGACAC ACTCGGCATG GACCGGGCGC GGGCGCTGCT CATGCGCATG GGGTTCGCTT CCGGGGCCCA GGACGCCGAG GTGTTCAAAA GACAGCTGGA GGGGGTGTCG GACCAGGAGG CGTTCCTGAT CGGGACACAA CTGCACACCC TGGAGGGAAT CGCCAAGGTA ACCACCCTGG AGCTGGAGGT GGACCGTGCG GCCGGCAAAT ATTCCGGCCA GTTCATGTGG GAGAACTCCT GGGAAGGTAA CTGGCACAAG AAGCATTACG GAATCCACAC CGCCCCGACC TGCTGGAGCC AGTTGGGCTA TGCCTGCGGC TACACCTCAA CCGTCATGGG GCGCCCGATC CTCTACAAGG AGGTGGAGTG CGTCGGCAAG GGAGACAGGT ATTGCCGCAC CGTGGGAAAA CCGCTTGAGG AGTGGGAGGA CGCTGCCGAA TTCAGGAGGA TATTCCATCC CGACCCCATC GTCGACGAGC TGATGGAACT GCAGACCCAG GTGGTGGAAC TGCGCGCCGC CTTCAACGAG AAGGAGAAGC TCCCCGCCGA CGTGGTGGGC AAGTCCCAGG CCTTCATCAC AGCCTTCGGT CTGTTGAAGC AGGCGGCGGG AAGCCAGATC ACCGTCCTTT TGCAGGGGGA GACGGGGGTG GGCAAGGAGG TGTTCGCGCG CACCCTGCAC GAGAAAAGCA GCAGGAGCAA GGAGTCTTTC ATCGCCGTGA ACTGCGCGGC CATCCCCCAC GACCTGGTGG AGTCGGAGCT CTTCGGCGTG GAAAAGGGAG CCTACACAGG CGCCCTCACC TCGCGCCCCG GGCGTTTCGA GCGGGCGAGC GGCGGCACCT TGTTCCTGGA CGAGATCGGC GATCTGCCGC TGCCGGCGCA GGCAAAACTT CTGCGCGTGC TGCAGGAAGG CGAAATCGAG CGACTGGGAG ACCACAAGGT CCGCAAGGTT GACGTAAGGC TCGTGGCGGC GACCAACATC GACCTGAAAC AGCTCGTGCA AGAAGGGAAA TTCCGCTCCG ACCTCTACTA CCGCCTGAAC GCGTTCCTGG TCAAGATCCC TTCTTTAAGG GATCGCAAGG AGGACATCCT GCTCCTTGCC GATCGCTTCG TGGAGAAGTA CGCGGCGATA CAGGGAAAGA AGCTTAAGGG ATTCACCGAC AAGGCCAAAC GGGCACTTTT GGCGTACCAG TGGCCGGGAA ACATCCGGGA ATTGCAGAAC ATGGTGGAGC GGGGGGTGAT CCTGGCCCAG CCCGGCGCCC GGATAGAGCT GGACCAGATG TTCTCCTCGA CCGCTGAGGA AGGAAGCGTG GAGTACGGCG TGAGCAGCAC CGGCAGCCTC GACATCAACC GGGACTCCGC GGGAAAGGAG CTCTGCGAGG CGGTTTTAGA CGGCGGCCTG ACGCTTGAGC AGGTGGAGGG GATGCTGATC AGGGCCGCTG TGGAGAAGGA GGGGGGAAAC CTCGCCGCTT CCGCGAGGGC GCTGGGTCTC ACCCGCCCCC AGCTTGCCTA CCGCCTGGGA AGCCTGCAGC AAAAAGGGGA CACGTCTTTC CGCCTCCAGG ATCCTTTCGC CAACCCCGAC CTCTACTGA
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Protein sequence | MSKSQKKKNI SGEATKNKVR SLVHFCSDTG NIWLHEHRML LIHAEAQGAM RRELIDTLGM DRARALLMRM GFASGAQDAE VFKRQLEGVS DQEAFLIGTQ LHTLEGIAKV TTLELEVDRA AGKYSGQFMW ENSWEGNWHK KHYGIHTAPT CWSQLGYACG YTSTVMGRPI LYKEVECVGK GDRYCRTVGK PLEEWEDAAE FRRIFHPDPI VDELMELQTQ VVELRAAFNE KEKLPADVVG KSQAFITAFG LLKQAAGSQI TVLLQGETGV GKEVFARTLH EKSSRSKESF IAVNCAAIPH DLVESELFGV EKGAYTGALT SRPGRFERAS GGTLFLDEIG DLPLPAQAKL LRVLQEGEIE RLGDHKVRKV DVRLVAATNI DLKQLVQEGK FRSDLYYRLN AFLVKIPSLR DRKEDILLLA DRFVEKYAAI QGKKLKGFTD KAKRALLAYQ WPGNIRELQN MVERGVILAQ PGARIELDQM FSSTAEEGSV EYGVSSTGSL DINRDSAGKE LCEAVLDGGL TLEQVEGMLI RAAVEKEGGN LAASARALGL TRPQLAYRLG SLQQKGDTSF RLQDPFANPD LY
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