Gene GM21_2478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_2478 
Symbol 
ID8137819 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp2898234 
End bp2899040 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content60% 
IMG OID644870088 
Productpolysaccharide export protein, PEP-CTERM sytem-associated 
Protein accessionYP_003022279 
Protein GI253701090 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1596] Periplasmic protein involved in polysaccharide export 
TIGRFAM ID[TIGR03027] putative polysaccharide export protein, PEP-CTERM sytem-associated 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones141 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTGA AAGTCCTGCT TTTGTCCGTC GTTCTGATCA CGTGCATGCC TCTTTTTGCC 
CTGGCGGCTG ACTACCAGAT CGGCGAGGGG GACAGCCTCG ACATCGCCGT ATGGGGGGTG
AAGGAGCTGA ATTTCCCGGT GAAGGTACGC CCGGACGGCA AGATCACGGT TCCCGGGCTG
GGCGAGGTGG TCGCCAGCGG CATGTCGCCG AGCGCGCTAC AGGCGCATCT CGCCGTAAGA
CTCAAGGAAC TGGTGAAAAA TCCCATCGTC ACGGTCACCG TGCGCGATAT CACCAACTCC
AAGGTCTACA TATTCGGCTC CGGCGTGAAG GCCGCCGTCT ACGATCTTTC GCGCCGCACC
ACGTTGCTGC AGCTCCTCTG CACGCTGCCC GACGTGAAAA CGGCCGATCT CAGAAACGCC
TATCTGTTGA GGGGAGGCCA GAAGGTCAAG ACCGACCTGC ACCGGCTCTT CACCTTGGGA
GACATCGGGC AGGACCTGCT CCTTGAGTCC AACGACTCCC TCTTCATCCC GCTTTTGACC
GACCGCAGCG TCTACGTCCT CGGGGCGGTC AACACGCCCA AGGCGATCGA GTACCGGGAG
GGGATGAAGG TGATGGAGGC GATCCTGGAA TCGGGAGGTT TCAACAAGTT CGCCAACCAG
AACGAGGTGC TGGTGCGCAG GAAGATCGGC GCGCAAGAGC AGTCGCTGGA GGTGAAGGCC
AAGAAGCTTT TCAAGGACGG GGATCTGAGC CAGAACATCG AGCTCAAGCC GGGCGATTAC
GTGCTGGTGA AGGAGAGTTT CTTCTAG
 
Protein sequence
MKLKVLLLSV VLITCMPLFA LAADYQIGEG DSLDIAVWGV KELNFPVKVR PDGKITVPGL 
GEVVASGMSP SALQAHLAVR LKELVKNPIV TVTVRDITNS KVYIFGSGVK AAVYDLSRRT
TLLQLLCTLP DVKTADLRNA YLLRGGQKVK TDLHRLFTLG DIGQDLLLES NDSLFIPLLT
DRSVYVLGAV NTPKAIEYRE GMKVMEAILE SGGFNKFANQ NEVLVRRKIG AQEQSLEVKA
KKLFKDGDLS QNIELKPGDY VLVKESFF