| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_2354 |
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| Symbol | |
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| ID | 8137695 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | - |
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| Start bp | 2736417 |
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| End bp | 2740472 |
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| Gene Length | 4056 bp |
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| Protein Length | 1351 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644869969 |
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| Product | conjugative relaxase domain protein |
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| Protein accession | YP_003022160 |
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| Protein GI | 253700971 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
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| TIGRFAM ID | [TIGR02686] conjugative relaxase domain, TrwC/TraI family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 101 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCTCCC TTTCCAACGG TGGCATGACG GCGAGCCAGG CGGGTAAGTA CTTCGCCGCC
GAGGACTACT ACCTCAAAGG TGGGGAGTCC AGCCGGTGGC TCGGGAAAAC CACGGCGGAG
CTGAAACTCG CGGGTAAGGT GGGGGAGGAG GAATTCCGTA ATCTATGCGC CGGGAAGACC
CCCGACGGAG CGGCGCAGTT GGTCGCGCCG AAGGTGGTCA GAAAAGAAGG GGAGCCGCAG
GAACTGCACC GGGCCGGCAA CGACCTTACC TTCTCGGCTC CCAAGTCGCT CTCCATAGGG
TACGCCGCCG GGAATCACGA GCTGAAGGAG ATCTGGGACC AGGCCGTCGA GAACACCATG
CGGTACGTGG AGGAGCATTA CAGCCAGTAC CGCACCCCCC ACGGGATCAG AAACGCCGGG
AACCTCCTCG CCGCCAAATT CGACCACGTG ACCAGCCGGG CCCTCGACCC GGACGTGCAC
AGTCATGTGT TCCTGCTCAA CATGGTGCAC ACCCCGGACG GCAGATGGCT CGCCAACGAG
CCGAAGAGCA TCTACCAGGA CAAGATCTCC ATCGGCATGC TGGCCCGCCA GGAGTCGATC
TGCCTCTTGC GGCAGGCGGG GTACCAGGTC TACTTCACGG ACAGGGAGAA GTTCCTTTTC
GAGATAGAGG GGGTGAGTCC CGAGGAGATC GAGTTTTTTT CCAAGCGGGG AGCGGCCATC
GAGGAGCAGG TCGCCGAGTG GCAGCAGGAA GGGAAATATC CCGGGGTTTC CGAGACGCTT
CTGAAACAGT GGGCCGCCTT CGGTACCCGG GACCACAAGC TCAAGATAAC CATCCAAGAG
ATACGGCAGA AATGGGATCA ATGGTTCGTG GAGGTGGGGG GCACGGCGCA GGAGGTGCGG
GAGCGGATCG AGGCGACCAA GCAACTGGGG CAGGAGGCGG ACGCTGGAAA CAGCGGAAAA
ACAGAATCCC AACCGTTAAC ACCAACACAT TCGTTCCCCC CTGAAAAGAC GGCGAGGGAG
GTCTTGAAAG ACGCCTCCTC GTTTCTTACC GACAAAGAAG TCATCTTCGA CCGCGCCCAG
CTCATCAAGA CCGCCGTGCG GATCTCCGGC GGCGAGCACG ACATCCGCCA GATCGAGAAC
GCCTTAAAGG AAAAAAGAGA GGTCCACTTT CTGGGTCAGG AGCCGCGCGG TCCGCAAGCC
GGAAGGGAGT TTTTCACCAC CCGCGAGATG CTGAAGCTGG AGGCGCGGAA CGTCGAGGCG
TTGGAGTATC TGGGAGCTTT CGCTCCCGTC ACTTCCAACT CCGAGGTCGA GGCCTATCTG
AAGGGCCTCG CCGGGGCAGG GGAGGGGACT CTAACCCGGG AAGAAGCCAG CTTCACTGAA
GCCTTTGAAG CAGGAGCGGC GTCAGCCGCT CCGACTGGTT TTCTCAACCT CACCCCGGGG
CAGAGGGAGT ACGTCCTGAA CGAACTCGCC GGCGACAAGG GGTTCACCGT AACCCAAGGG
GATCCGGGAA CCGGCAAGAC GTTCGCCGCC GGGGTGGTCG AGCGTTTCAA CGACGAGGTG
TTGCAGCCAA GCGGCAGGGC GCACCACACC CTGAACCTCG CCTACACAGG AAAGGCCGCC
CTGGAGATGG AGCAGGCCAG CGGAAAGGAG GCTTTCACGG TCGATTCCTT CCTGAACCGC
TACCGCAAAA GCCCGGACCT CTCCGCCTTC CCGGGAATGG AACGACCTGC CCCGCGAGGA
GCCCAAGTGG CGCTCAAGCT GGACGAGGCC TCCTTCGTTG GGGGGCGCCA GGCGGAGCAC
CTGTTGCGGG TGGTCCAGGA CCTGAAATCG AAGGGAGTCC AAGTCAAGCT CTCCATGATC
GGGGACACGA AGCAGCTGCA GAGCATCCAG GCGAGTCCCT TCTTTTCCCA CGCCAGCGAG
CTCGCCCGCC AGGAGCTTGG CGATTTCGCG CTGATGAAGG AAATAACGCG CCAGAAGGAC
GCGGGACTCC TTGACGTCGC CGAGTCCCTG AACTTGGAGG GGGAGCAGCG CCTCTTGGGA
AAGAACGCGA CCGACGCCCT GAAGCTTTTG GAGCAGCAGG GACGGGTGCG GGAGATTCCC
ACCTATGACG CCCTGATGCA GGCCGCCGTG GAGTGTTACG TCGAGGAGGC GGCCAAGCCC
TCCCGCGACC CGGCCGCCGC AGCGGCCGGG GAAAAACAAA GCGTCCTGAT CGTCACGCCG
CTGAACGCGG ACCGCCAGGA ACTAAATGCG AAGATCCGCG CAACCAAAAT GGAAAAAGGG
GAGCTGGGTC AAGGAGTCGC AGTCCAGGTT TACGTCCCGG TGGAACAGGG CGTCACCGCC
TCCAGCTACC ATCCCGGCAT GAACATCGTC TTCACCGGGA AGCGCGCCAA GGACGGCGCC
ATGGAAGTTC CCGAGGGGGT CGCGCTCAAC CAGCAGGGGG AAGTGCTCTC GGTGGACCCG
GTAAGGAACA GGGTCGCGGT GGTATTCCAG GGCGACCGGG GAGGAACAAC CACGAAGACC
TTCGAGGCCT CCGGACTCGC CAACAAAAGC GCTCTGTACC GGGTGGAAGA AAGGGAATTC
GCGGCCGGGG ACATAGTGGT CTGCAACAAG ACCACCTTCG ACAGGAGCAC CGTGTCCGCC
CGCAGCGGCA AGACGATCAA GCTCCGCAAC GGAGAAAGGG GTGTGATCGA GGCCATGGAG
GCCGCCGAGA AGGGTAGCGT CGCCCTGATC AGGTTCCCTG GCGACAGGGT AGTCAAGGTG
AACCTGGACC GCTTCGGTCC CCAACATATC GAGCACGGCT ACGCCGTCAC CGCCCACAAA
GCCGAGGGGG AGACGGTCGA TAGCGTGATC TCCTTCAACT ACGTCCGACC GGCGAGCCAG
AACCATGGAA ACGCCCTGCA GACGCTCACC GGCATCGACA CCACTGAGGA GCAGTTCCGG
TGCTGGGACG GCGCCGTCAC CGACTACGAG AAGAGATACC AGCTGATGAC GGAGGTGGGG
GGGCACCCCG GGCGGATATC CTTCGTGATG ATCGCCGACG CGCAGAACGC CGAGGAGCAT
AAGGGGATAG CCCTTACCTT CGTGAACAGT CCAGCCGTGG TGAAGGATGT AGAGGTTCGC
CAGCAGATGA GAGAGGCGGG CATGTACTGG GCCAAAAAGG CACGCAGCTG GGTCACCGCC
GTCGTCAACG ACCGAGCCAT GGGGATCATG TCCGGGCACC CCCTGCGCGA CCAAGGTTAT
CTCAACCATC TGCGTGAACA GTTCGTGAAG GAAAGCCCCC CCGGCACCCA CGCCCTGCAG
ACGCTCACCG GCATCGACAC CACTGAGGAG CAGTTCCGGT GCTGGGACGG CGCCGTCACC
GAGTACGAGA AGAGATACCA GCTGGAGACG GAGGTGGGGG GGCACCCCGG GCGGATATCC
TTCGTGATGA TCACCGACCG GCAGAACGCC GAGGAGCATA AAGGGATAGC CATTACCTTC
GTGAACAGTC CAGCCGTGGT GAAGGATGTA GAGGTTCGCC AGCAGATGAG AGAGGCGGGA
ATGTACTGGG CCAAAGACGC GCACAGCTGG GTCACCGCCG CCGTCAACGA CCGAGCCATG
GGGATCATGT CCGGGCACCC CCTGCGCGAC CAAGGTTATC TCAACCATCT GCGCGAACAG
TTCGTGAAGG AAAGGCCCCC CGGCACCCCC CTCCCCGTCG ATAGCCCAAC TGTGCACGCG
GAGATCGACA GCACTATCGA CGTTGAACGC TATGGCCGCG CCTCTTACAA CCTCTTGAAC
GTGGCTCTCA CCCGCTCCAG GTATCAGACG ACAGTCTTCA CCAACTCCCT CGAAGGGTTG
GATCAAGCGG TGCAGACGGT GGACCAGAAA ACCACCAGCA TCACCAGCGC GATGCTGCAA
AGAAAACCGC CGAGCCTCCC GACCAGGTCA CAAGAACGAC CTTCCAGACA ACACCAGAAA
AAAGCGGACA AGGCGCGATC CGTACCGCCG GCGTCGCCCG TCAAAGCGCC GGATCGCGAA
CTGGCCAAAG AGCTGATACG GAAGAAACCC TCCTGA
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| Protein sequence | MLSLSNGGMT ASQAGKYFAA EDYYLKGGES SRWLGKTTAE LKLAGKVGEE EFRNLCAGKT
PDGAAQLVAP KVVRKEGEPQ ELHRAGNDLT FSAPKSLSIG YAAGNHELKE IWDQAVENTM
RYVEEHYSQY RTPHGIRNAG NLLAAKFDHV TSRALDPDVH SHVFLLNMVH TPDGRWLANE
PKSIYQDKIS IGMLARQESI CLLRQAGYQV YFTDREKFLF EIEGVSPEEI EFFSKRGAAI
EEQVAEWQQE GKYPGVSETL LKQWAAFGTR DHKLKITIQE IRQKWDQWFV EVGGTAQEVR
ERIEATKQLG QEADAGNSGK TESQPLTPTH SFPPEKTARE VLKDASSFLT DKEVIFDRAQ
LIKTAVRISG GEHDIRQIEN ALKEKREVHF LGQEPRGPQA GREFFTTREM LKLEARNVEA
LEYLGAFAPV TSNSEVEAYL KGLAGAGEGT LTREEASFTE AFEAGAASAA PTGFLNLTPG
QREYVLNELA GDKGFTVTQG DPGTGKTFAA GVVERFNDEV LQPSGRAHHT LNLAYTGKAA
LEMEQASGKE AFTVDSFLNR YRKSPDLSAF PGMERPAPRG AQVALKLDEA SFVGGRQAEH
LLRVVQDLKS KGVQVKLSMI GDTKQLQSIQ ASPFFSHASE LARQELGDFA LMKEITRQKD
AGLLDVAESL NLEGEQRLLG KNATDALKLL EQQGRVREIP TYDALMQAAV ECYVEEAAKP
SRDPAAAAAG EKQSVLIVTP LNADRQELNA KIRATKMEKG ELGQGVAVQV YVPVEQGVTA
SSYHPGMNIV FTGKRAKDGA MEVPEGVALN QQGEVLSVDP VRNRVAVVFQ GDRGGTTTKT
FEASGLANKS ALYRVEEREF AAGDIVVCNK TTFDRSTVSA RSGKTIKLRN GERGVIEAME
AAEKGSVALI RFPGDRVVKV NLDRFGPQHI EHGYAVTAHK AEGETVDSVI SFNYVRPASQ
NHGNALQTLT GIDTTEEQFR CWDGAVTDYE KRYQLMTEVG GHPGRISFVM IADAQNAEEH
KGIALTFVNS PAVVKDVEVR QQMREAGMYW AKKARSWVTA VVNDRAMGIM SGHPLRDQGY
LNHLREQFVK ESPPGTHALQ TLTGIDTTEE QFRCWDGAVT EYEKRYQLET EVGGHPGRIS
FVMITDRQNA EEHKGIAITF VNSPAVVKDV EVRQQMREAG MYWAKDAHSW VTAAVNDRAM
GIMSGHPLRD QGYLNHLREQ FVKERPPGTP LPVDSPTVHA EIDSTIDVER YGRASYNLLN
VALTRSRYQT TVFTNSLEGL DQAVQTVDQK TTSITSAMLQ RKPPSLPTRS QERPSRQHQK
KADKARSVPP ASPVKAPDRE LAKELIRKKP S
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