Gene GM21_2109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_2109 
Symbol 
ID8137445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand+ 
Start bp2451221 
End bp2451901 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content63% 
IMG OID644869724 
ProductSigma 54 interacting domain protein 
Protein accessionYP_003021919 
Protein GI253700730 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones95 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAATCC TGCAAAGCCA AGAGGTCAGC AAAAGCTACC GTATCGGAAA CCGCTTGATC 
AAGGTGCTCG ACTCCGTCTC GCTGACCGTT GAGACCGGCG AGTTCCTGGT GGTGAAGGGG 
GAAAGCGGCA GCGGCAAATC GACGCTGCTC ACCATTCTTT CCGGGTTGGA CCGCCCGGAT 
CAGGGAAGGG TCCTCATCGG CGGGGAGGAC ATCACCGACT TGGGCGAAGA CGCCCTGGCC 
CCCTTGAGAA ACAGCGCCTT CGGCTTCGTG TTCCAGTCCT TCCACCTGGT CCCCTCCCTG 
AACGCCCTGG AGAACGTTAT GTTCCCGGCG GAGCTCAAAG GGGATCTCGA AGCCCGCGCC 
AAGGCCGAGG CCCTCCTGGA AAGGGTCGGG CTTTCCGGGA GGCTCAACAG TTTCCCGCAC 
CAGCTCTCCG GCGGCGAGAA ACAACGCTGC GCCATCTGCC GCGCCCTCAT CAACGACCCG 
CGCATCGTCT TCGCCGACGA GCCCACCGGC AACCTCGATT CCATAAACGG CGCCGCCATC 
CTGGAGCTGC TCTTGGAACT GCAGCGCGAA CGCGGCACCA CCCTCATCCT GGTGACGCAC 
AGCCCCGAGA TCGCACAGCG CGCGCATCGC GTGGTCACGC TCAAAGACGG CAGGATCGTC 
ACGGGGGAGG AGCATGGTTA G
 
Protein sequence
MTILQSQEVS KSYRIGNRLI KVLDSVSLTV ETGEFLVVKG ESGSGKSTLL TILSGLDRPD 
QGRVLIGGED ITDLGEDALA PLRNSAFGFV FQSFHLVPSL NALENVMFPA ELKGDLEARA 
KAEALLERVG LSGRLNSFPH QLSGGEKQRC AICRALINDP RIVFADEPTG NLDSINGAAI 
LELLLELQRE RGTTLILVTH SPEIAQRAHR VVTLKDGRIV TGEEHG