| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_1999 |
|---|
| Symbol | |
|---|
| ID | 8137333 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | + |
|---|
| Start bp | 2316840 |
|---|
| End bp | 2318132 |
|---|
| Gene Length | 1293 bp |
|---|
| Protein Length | 430 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644869612 |
|---|
| Product | amidohydrolase |
|---|
| Protein accession | YP_003021809 |
|---|
| Protein GI | 253700620 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase |
|---|
| TIGRFAM ID | [TIGR01891] amidohydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 1.38809e-26 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAACGACC AAGTAACCAG CGGCACTCTC ACCGGCATGG TTGAAGCGGA ACTCCCCTCC
CTGTCCGCCA TCTACCGGCA GCTGCACGCT AAGCCCGAAC TGTCGGGGCA GGAGGAGCAG
ACCGCGGCAC TTGTCGCCGC CGAACTGCGC GCTCTGGGCT ACGGCGTGAC CGAAGGGGTG
GGAAGGTACC GGAATTACGA CTGGCCTGGC TACGGCGTCG TCGCCGTTCT TTCCAACGGC
GTAGGGCCGA CCGTGCTGCT TCGGGCCGAC ATGGACGCGC TCCCCGTTCA GGAAAAGACC
GGCCTTCCCT ACGCCAGCCG GGTCAAGGGG ACCTACCGCG ACGGCAACGA GGTGCCGGTC
ATGCACGCCT GCGGGCACGA TATCCATGTC ACGGTCTTAT TGGGCGTGGC GCGGGTGATG
GCGCGGCTCA GGGAGAGTTG GCAGGGATCC CTGGTTTTGG TCGCTCAACC CGGCGAAGAA
GGGGGGGGCG GGGCGGACGC CATGTTGGAC GACGGCGCCT ATGGCCACTG CCCAAAGCCC
GACTTCGCCC TGGCGCTGCA CAGCACGCTG CACCTTAAGG CCGGCAGCGC CGGGTACGCC
CCGGGGAACT TCATGGCGAG CTTATGCGAA CTCGAGGTAG TGGTCCGCGG CGTCGGCTCC
CATGGCTCGG CCCCCGAGTG CGGCAGGGAT CCGGTCGTCA TGGCCGCCCA ACTGGTGCTC
GCCCTGCAGA CCGTCGTCAG CCGGGAGAAA AACCCCAGCG AACCGGCAGT CTTGAGCGTC
GGCTCCATTC ACGGCGGGGC AGCCAGCAAC GTGATACCGG ACGAGGTCGT CCTGCAACTC
AGCGTCAGGA CCTATGACGA CGGCGTTCGC GACAGTATCG TCGAATCGGT GCGCCGGATG
GCCGCTGGCG TGGCGCTGGT CGCCGGGGTG CCCGAGGACC GGTCTCCGCT CGTGAAGGTG
AAGGCCTCCC ATCCTGCGAT CTACAACGAC CCGGAACTGG CCGAGCGGGT GGCGGCCTCG
CTGCGCCTGG CCTTAGGCCC CGGCAACGTC TACCGCAGCG AACCGAAGAT GGTGAGCGAG
GATTTCGGAT CCTGGAGCCT GGAAGGGGAG ATTCCCATCT GCATGTTCTG GCTGGGCGCA
GCCGATCCCG AAAAATTCGA GGCAAGCCGC AAATGCGGAG TGCCGCTTCC TTCGCACCAT
TCTCCTCTGT TCGCCCCACT CCCGGAGCCG ACCATTCGGG CGGGTGTTGC CGGCCTGGCC
ACGTCGGCAC TTGACCTCTT CAAGAGCAGG TGA
|
|---|
| Protein sequence | MNDQVTSGTL TGMVEAELPS LSAIYRQLHA KPELSGQEEQ TAALVAAELR ALGYGVTEGV
GRYRNYDWPG YGVVAVLSNG VGPTVLLRAD MDALPVQEKT GLPYASRVKG TYRDGNEVPV
MHACGHDIHV TVLLGVARVM ARLRESWQGS LVLVAQPGEE GGGGADAMLD DGAYGHCPKP
DFALALHSTL HLKAGSAGYA PGNFMASLCE LEVVVRGVGS HGSAPECGRD PVVMAAQLVL
ALQTVVSREK NPSEPAVLSV GSIHGGAASN VIPDEVVLQL SVRTYDDGVR DSIVESVRRM
AAGVALVAGV PEDRSPLVKV KASHPAIYND PELAERVAAS LRLALGPGNV YRSEPKMVSE
DFGSWSLEGE IPICMFWLGA ADPEKFEASR KCGVPLPSHH SPLFAPLPEP TIRAGVAGLA
TSALDLFKSR
|
|---|
| |