| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_1742 |
|---|
| Symbol | |
|---|
| ID | 8137073 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | - |
|---|
| Start bp | 2028280 |
|---|
| End bp | 2028861 |
|---|
| Gene Length | 582 bp |
|---|
| Protein Length | 193 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644869354 |
|---|
| Product | isochorismatase hydrolase |
|---|
| Protein accession | YP_003021554 |
|---|
| Protein GI | 253700365 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1335] Amidases related to nicotinamidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 130 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCCGA CAACCCCGGA GAGCGAAGCA GAGAACACGA TGTGCCTGAT TCTGGTCGAC
CTGCAAAACG ATTACTTCCC CGGCGGGAGC ATGGAACTGT CGGGGATGGT GGAAGCAGCC
GCCAACGCGA AGCTCCTGCT GGAGCAGGCG AGGAAGAACG GCACCCATGT CATCCACATC
CAGCACATCG CCGCGCACCC AGGCGCCACC TTTTTCGTGC CCGGCACCGA CGGAGCGGAG
ATAAACCCGG TGGTCGAGCC TGCTACCGGC GAGTCGATCG TGGTCAAGAA CTACCCCAAC
AGCTTCAGGG GGACCTCGCT CTTGGAACTG CTCGCGGCCC GGCAGGTGAA GGACTTGGTG
ATCTGCGGGG CGATGAGCCA CATGTGCATA GACGCAACGG CCAGGGCGGC GTTCGATTTG
GGCTTTAACT GCACCGTCGT CGCTGACGCC TGCGCTACCC GGGACCTGCA GTTCCAGGGA
CGCACGGTCA AGGCCGCCGA TGTGCACGCA TCCTTCATGG CTGCACTTGC AGTCCTTTAC
GCCAAGATAG TCACCACACA GGAGATACTG GGGCAAATCT AG
|
|---|
| Protein sequence | MSPTTPESEA ENTMCLILVD LQNDYFPGGS MELSGMVEAA ANAKLLLEQA RKNGTHVIHI
QHIAAHPGAT FFVPGTDGAE INPVVEPATG ESIVVKNYPN SFRGTSLLEL LAARQVKDLV
ICGAMSHMCI DATARAAFDL GFNCTVVADA CATRDLQFQG RTVKAADVHA SFMAALAVLY
AKIVTTQEIL GQI
|
|---|
| |