Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_1630 |
Symbol | |
ID | 8136961 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | + |
Start bp | 1898631 |
End bp | 1899503 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644869243 |
Product | shikimate 5-dehydrogenase |
Protein accession | YP_003021443 |
Protein GI | 253700254 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0169] Shikimate 5-dehydrogenase |
TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 173 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTATTA CAGGAAAAAC CAGGGTCACC GGGATCATCG GCTGGCCGGT CGCTCACTCC CTTTCGCCGC CGATGCACAA CGCCGCCTTC GAGGCGCTCG GGCTCGACTT TGCCTACGTC CCGTTCCCTG TGGCGCCGGA GCGCCTCGCC GCGGGGATAG CCGGCCTCGC CGCGCTGGGT GTGGTCGGCT TCAGCGTCAC CATTCCGCAC AAGGTGGCGA TCTTGCCCCT TTTGGACCGC ATCGCGCCGG AGGCCGAATT GATCGGCGCG GTGAACACCG TCGCGGTAAA GGAAGGGATC TTGACCGGCT ACAACACGGA CGGTATCGGT CTTTTGTCCG CGCTCCGCTC GAAGCTCGGA TTTCAACCCG AGGGACGCTC GGTGCTGGTG TTAGGCGCTG GCGGGGCCGC CAGAAGCGCC GTCGCCTCGC TGGGGCTCGC CGGCGCCGGC CGGGTCGAGG TGGCGAACCG CTCCCTTGAC GCGGGGCGCG GGCTGGCAGA GACGATGGGC GAGCGCCTCC CCGGTACAGT TTTCGGGTTT CAGCCGCTGG GCCGGGTATC CGATAAGGGA TACTTGTCCG GCTTCGACCT CGTGGTCAAC ACCACCTCCG TCGGGATGGC GGGGGACGGC TTCGCCGGGC TCGATCTTTC CGCGCTGAAG CGCGGCGCCA GCGTCTACGA CATGGTGTAC GCGCCTTTGG TAACCCCCTT GCTGGCGCAG GCGGAGGTTG TAGGTGTGCC GAGCGCGAAC GGGCTGGGGA TGCTGGCCGC TCAAGGGGAG GCGGCATTCC GGATCTGGAC CGGAGCCGTC CCTCCGGAGG GGTGCATGGA AAAGGCTCTC GCCGCCCGGC TCGCAACCCC AGGTAACCCT TGA
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Protein sequence | MTITGKTRVT GIIGWPVAHS LSPPMHNAAF EALGLDFAYV PFPVAPERLA AGIAGLAALG VVGFSVTIPH KVAILPLLDR IAPEAELIGA VNTVAVKEGI LTGYNTDGIG LLSALRSKLG FQPEGRSVLV LGAGGAARSA VASLGLAGAG RVEVANRSLD AGRGLAETMG ERLPGTVFGF QPLGRVSDKG YLSGFDLVVN TTSVGMAGDG FAGLDLSALK RGASVYDMVY APLVTPLLAQ AEVVGVPSAN GLGMLAAQGE AAFRIWTGAV PPEGCMEKAL AARLATPGNP
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