Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_1276 |
Symbol | |
ID | 8136602 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | + |
Start bp | 1487737 |
End bp | 1489665 |
Gene Length | 1929 bp |
Protein Length | 642 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644868889 |
Product | PAS/PAC sensor hybrid histidine kinase |
Protein accession | YP_003021094 |
Protein GI | 253699905 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 110 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCACCATT TTCAGCAGAC AGGTACGGAC GACCCTCTGG AACACGCGCA GCAGGAACTA AAGGCTGCCA GGCTTGAGCT GCAGGCGAAA AACGCGGAGC TCGAACGCGC CCGAAACGAC CTGGAGAATT TCCTGAGCTG CGCCTGGACC GCCACCGTCT TCTTCGACCG CGAGCTCCGG CCGACGCGCC TGACTCCGAC CCTGGCGCAG CTTTTGGATC TCTCCCCCGC CGACACCGGA GAGCTTTTGC GCAAGCTTTG CCGCAGGCTC GACTGGCCCA GCGCGGACGC GGAACTCCGG AGCGTGGTCG GCGGCGCCGT CGTCCCGGAG CGGGAGGTGT CGGACCTGCA GACGGGGCAC CAGTTCCTGC TGAGGCTCTT TCCCTACCTG AACGCCGAGG GGGAGACCGA GGGGGCCGTG CTGAAGCTGA TCGACATAAG CGACTACAAG CTGGCCGATC AGCGGCTCCT CGAATACCGC GCGGTGTTCG AGTGCACAGG CGACATGATC TACGTGTTCG ACCGCGGCTA CCGCTTCATC CTGGCGAACA AGGCGTACCT CGAGTGCCAC CGGGTGCGTC ACGAGGAGCT TATCGGCCGC ACGGTACGGG ATCTTTTGGG ACCGGCGATG TTCGCCGAGA TTAAGGGGCG CATCGATGCC TGCTTCGCCG GCGAAGAGGT GATCTTCGAG AGCCGGTACG ACTACCCCGC CAAGGGGGTA CGGGACATCC TGATCACCTA CACGCCGCTT AAGAATGGGG ACCGGGTCGA CCGGGTCGCC TGCCTAATCA AGGACATGAC GGAGAGGACC CAACTGGAGG AGCAGCTGCG GCACGCGCAG AAAATGGAGG CGATCGGCAC GCTGGCCGGG GGGATAGCAC ACGACTTCAA CAACCTCTTG ACCGTCATCG CCGGCTATGC GTCGCTGATC CAGTTCAACT CCCAGGGAAG CGAGGTCGCC TCCATGGCGG CCGAGATCCA GGGATCGGTG GAGCGGGCGG CGGAAATGAC ACGGGGCCTC CTTGCTTTTT CCAGGAAGCA GGAGGTGAAC TTGATGCCTG TCGACCTGAA CCAGCTTGTC GAGGGGCTGC ACAAGAGCCT GAGGCGGCTC ATCACTGAAG ATATCGAACT GGCGGTCGAG TTCTCCGATG CCCCGCTTAT CGTCTCCTCG GACAAGGGGC AGTTGGAGCA GGTGCTCTTC AACCTGGTGG TGAACGCGCG CGACGCCATG CCGTCCGGGG GGAGGCTCTC GATCCGGACC GAGCGGTCGC AGCTAAACCA CGCCCTGATC ACCGTCGCCG ACACCGGGGT CGGGATGAGC CGCGAGGTGC AGGACCGTGC CTTCGAGCCT TTTTTCACCA CCAAGGAGCT GGGAGTAGGT ACCGGGCTTG GGCTTTCCAC CTGCTACGGC ATCATCAAAA AGCACAACGG CGTCATAGAG CTGCAGAGCG AGCCGGGTGC CGGGACCGTC TTCAGCATCT ACCTCCCGCT CTCCGCACAG CAGCCGGAGG CGGCCTACAC CGGCGGCGGC GATCGATGGG AGACGGGCAA CGAGACGGTG CTGCTGGTCG AGGACGACGA GACGGTGCGG ACGATGACTC GTCTTTTGTT GCAGCATAAC GGCTATCGCG TGCTCTGCGC CAAGGAGGGG GAGGAGGCGC TGAATATCTT CGCCGAGCAG GGCGACGGGG TGGACCTGCT GCTCACCGAC CTAGTCATGC CGCGCCTGAA CGGGACGGAG CTCTGTCTGC GGATCCACGC CCAGAGGCCC GGTTTCCCCA CCATCTCCAT GAGCGGGTAC CCGGCTGACG TCATGTCGCG GAAGGGGATC GCCGCAACGG GGAACTACCT CCCTAAGCCG ATCAAGCCGG AGCTTTTGTT GCGCCGCATC CGCGAGACGC TCGATGCTCC CCGTGCCGCA TCCGCCTAG
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Protein sequence | MHHFQQTGTD DPLEHAQQEL KAARLELQAK NAELERARND LENFLSCAWT ATVFFDRELR PTRLTPTLAQ LLDLSPADTG ELLRKLCRRL DWPSADAELR SVVGGAVVPE REVSDLQTGH QFLLRLFPYL NAEGETEGAV LKLIDISDYK LADQRLLEYR AVFECTGDMI YVFDRGYRFI LANKAYLECH RVRHEELIGR TVRDLLGPAM FAEIKGRIDA CFAGEEVIFE SRYDYPAKGV RDILITYTPL KNGDRVDRVA CLIKDMTERT QLEEQLRHAQ KMEAIGTLAG GIAHDFNNLL TVIAGYASLI QFNSQGSEVA SMAAEIQGSV ERAAEMTRGL LAFSRKQEVN LMPVDLNQLV EGLHKSLRRL ITEDIELAVE FSDAPLIVSS DKGQLEQVLF NLVVNARDAM PSGGRLSIRT ERSQLNHALI TVADTGVGMS REVQDRAFEP FFTTKELGVG TGLGLSTCYG IIKKHNGVIE LQSEPGAGTV FSIYLPLSAQ QPEAAYTGGG DRWETGNETV LLVEDDETVR TMTRLLLQHN GYRVLCAKEG EEALNIFAEQ GDGVDLLLTD LVMPRLNGTE LCLRIHAQRP GFPTISMSGY PADVMSRKGI AATGNYLPKP IKPELLLRRI RETLDAPRAA SA
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