Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_0980 |
Symbol | |
ID | 8136301 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | - |
Start bp | 1158396 |
End bp | 1159223 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644868594 |
Product | putative signal transduction protein |
Protein accession | YP_003020803 |
Protein GI | 253699614 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1639] Predicted signal transduction protein |
TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 70 |
Fosmid unclonability p-value | 0.297329 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCATTAC CGCTCAACAT CAAGCGCCTG TTGGCCAACC AACCGGTCGA TCTGCCGGTC TTCCACCCAG TGGCGCTGAG GCTGCAGCAC CTCCTTGCGA CCCCGGACTT CTCGATGGCC CAGGTAGTCA CACTGGCCAA CGAGGATCAG TCGCTGGCGG GACAGATCCT GAAGATGGCG AACTCCCCCC TGTATATCGG GCGTTTCCGC ACCGAGACCA TCAAGGATGC TGTGATCAGG CTGGGGGCGC AGCAGGTGTG CAACTTGGCG ATGGCGGCTT CGCAGGCGGG GCTCCATGTA TCTGAAGACC GCGTCATCAA CACTTTCATG CAGCCGCTTT GGCTGCACAG CCATGCCTGC GCCATGGGGA GCCGCTGGCT GGCCCGCAGC GCCGGCTATC CGCAGCACGC TGACCAGGCC TATATGGCGG GCCTTTTACA CGATATCGGC AAGCTCTACC TGATGAAGGC CCTGGAGCGG CTGAATAAGG CCGGTATGGC GCCGGCCCCG CTGGAGGGGT ACCTGCTGGA GATGTTCGAT GAACTGCATG TGGAGCAGGG GTGCCGCCTG ATGGAGCACT GGAACATGCC GAAGGTGTAC TACAACGTGG TGGCCAACCA TCACGACCAG AATTTCGATA CCACGGACAT CGTGCTGACG GCGGTGCGGC TGGTCAACAA GGCATGCAAG CTGAAAGGGA TCGGGCTTAT CAGCGATCCG ACCCTCGACC TCGAAACCGA GCCGGAAGCA TCCCTTTTGC AGTTGTCGCC GGAAGAGATG GACGATCTGC TGGTGGTTCT GGACCAGTCA CAAGAGCTGT CGCTGTAA
|
Protein sequence | MPLPLNIKRL LANQPVDLPV FHPVALRLQH LLATPDFSMA QVVTLANEDQ SLAGQILKMA NSPLYIGRFR TETIKDAVIR LGAQQVCNLA MAASQAGLHV SEDRVINTFM QPLWLHSHAC AMGSRWLARS AGYPQHADQA YMAGLLHDIG KLYLMKALER LNKAGMAPAP LEGYLLEMFD ELHVEQGCRL MEHWNMPKVY YNVVANHHDQ NFDTTDIVLT AVRLVNKACK LKGIGLISDP TLDLETEPEA SLLQLSPEEM DDLLVVLDQS QELSL
|
| |