| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_0922 |
|---|
| Symbol | |
|---|
| ID | 8136243 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | + |
|---|
| Start bp | 1098312 |
|---|
| End bp | 1098896 |
|---|
| Gene Length | 585 bp |
|---|
| Protein Length | 194 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644868538 |
|---|
| Product | Exopolysaccharide synthesis ExoD |
|---|
| Protein accession | YP_003020747 |
|---|
| Protein GI | 253699558 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3932] Uncharacterized ABC-type transport system, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 5.93119e-33 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACCCAGG AGATCAACAC TTTGGAGGAG ATGCTGGATC GTATCGGGGA GTCCTCCGAT
GACGAGGGGC GTGTCACCTT GGGGAGCATC GTCGAGTCGG TGGGGGGGAG GTCGTTCGGC
CCCCTGCTGC TACTGGTCGG GGTCATCATG ACCTCGCCTT TGAGCGGCAT GCCTGGTATC
CCGACGACGA TGGGGATTCT GGTGGTGCTG ATCGCGGGGC AGCTCCTCTT CGGCAAGGAG
CATTTCTGGC TGCCGCGCTG GGTGCTTAAG CGCTCTTTCG AACAGCAAAA GATCTGCAAG
GCGATCAACT GGCTGCGGCC GCCGGCGCGA TTCGTCGACC GCTGGCTCAG GCCGCGGCTT
CCCGCCTTCG TCAAGGGGTG GAGGATCCAC CTCATTTCCT TTTTCTGTGT CGCCATCGGC
GCCGTGATGC CGATCATGGA ACTGGTCCCC TTCTCGGCGC ATGCAGCGGG ACTGGCTCTT
ACCGCCTTCG GTCTGGCACT GATCGCACGG GACGGGCTCC TTGCCTTGAT TGCCTTCCTG
GTGATCGGGT TAAGCTTCGC CGTGTTGGCC TACAACATGC TCTGA
|
|---|
| Protein sequence | MTQEINTLEE MLDRIGESSD DEGRVTLGSI VESVGGRSFG PLLLLVGVIM TSPLSGMPGI
PTTMGILVVL IAGQLLFGKE HFWLPRWVLK RSFEQQKICK AINWLRPPAR FVDRWLRPRL
PAFVKGWRIH LISFFCVAIG AVMPIMELVP FSAHAAGLAL TAFGLALIAR DGLLALIAFL
VIGLSFAVLA YNML
|
|---|
| |