| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_0888 |
|---|
| Symbol | |
|---|
| ID | 8136209 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | + |
|---|
| Start bp | 1060356 |
|---|
| End bp | 1061516 |
|---|
| Gene Length | 1161 bp |
|---|
| Protein Length | 386 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644868504 |
|---|
| Product | hopanoid biosynthesis associated glycosyl transferase protein HpnI |
|---|
| Protein accession | YP_003020713 |
|---|
| Protein GI | 253699524 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
|---|
| TIGRFAM ID | [TIGR03472] hopanoid biosynthesis associated glycosyl transferase protein HpnI |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 3.0492799999999998e-21 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCTGAAGG AGCTGCTTCC ATTCCTGGTT ACCGCACCGG CTCTCGGCTA TGCCGCTTTC
ACGCTCTACT GCGGCCGCAG CTTCTTCGCG GGGCAAAGGC CCCTGCCCGA GCACACCCCT
CCCGTCTCCA TCCTGAAGCC GGTCAAAGGG GTGGACGGCG ACAGCTTCGA AAACTTCGCC
TCGTTCTGCA GACAGGAGTA CCCAACGTTT CAGATCGTCT TCGCCGCGGC CTCTCCCGCC
GATCCCGTCA TCCCCATCAT CGAGCGCCTC ATCGCCGCCT TCCCGCAGGT CGACATCTCG
CTGGTCGTTG ACGGCGCCGT CCATGGCGCG AACTACAAGG TGTGCAACCT GATGCATGCC
TGCGCGAAGG CCAAGTATCC CCTGCTCATC GTCTGCGACA GCGACATCCG GGTCGACAGC
CAATATCTGC GCCGGGTCTG CGCGCCTTTC GCCGACCCCC AAGTGGGGCT CGTGACATCG
CTTTACCGCA GCTCCAGCGT GAAAGGGGTC GGCTGCGCCA TAGAGGCGCT CGGCTTTTGC
AGCGAGATGG TCCCGAACGT CATGGCCGCG GTGAAACTGG AGGGTTTGAG CTTCGCTCTG
GGCGCCTCGA TGGCGCTGCG CCGGGAGGCG CTGGAGCGGA TAGGGGGCTT CGAGGCCCTG
GTGGACTACC TGGCCGACGA CTACCAACTG GGGAACATGA TCCACAACAA CGGGTTCCGC
CTGGAACTCT CGCCGCACTT CGTGGAGAGC GTCATGCGCG GCGACGAGAC GGTATCGGAG
GTGATGGCGC GGCAGCTTCG CTGGGGGAGG ACCATGCGGG TTTCCCGCCC CGGCGGTTAT
CTCGCCTCGG GGATAACGCT CCCCTTCCCG GCGGCCCTGC TGGCGCTGCT TATCTCCGGC
TTCACCGCGG CGGGTTGGCT GGCCGCGGCG CTGCTCTACC TGGTGCGTTT TGCCGTGTCA
CTCGCTTACA GCCAACTGTT GGTGCGGGAC CGGCTGTTGC CGCGCTGGCT TTGGCTCCTG
CCGCTGCGCG ACGCGCTCGC TTTCGCGGTA TGGGCGCTTT CGCTCCTGGG AAACCGGGTG
CGTTGGCGCG GAGAGCTGTT CCAACTGGAC AACGGGGGGA AGATCCGGTC GATAGGGAAA
AGGGGACAGG CTGGTTTTTG A
|
|---|
| Protein sequence | MLKELLPFLV TAPALGYAAF TLYCGRSFFA GQRPLPEHTP PVSILKPVKG VDGDSFENFA
SFCRQEYPTF QIVFAAASPA DPVIPIIERL IAAFPQVDIS LVVDGAVHGA NYKVCNLMHA
CAKAKYPLLI VCDSDIRVDS QYLRRVCAPF ADPQVGLVTS LYRSSSVKGV GCAIEALGFC
SEMVPNVMAA VKLEGLSFAL GASMALRREA LERIGGFEAL VDYLADDYQL GNMIHNNGFR
LELSPHFVES VMRGDETVSE VMARQLRWGR TMRVSRPGGY LASGITLPFP AALLALLISG
FTAAGWLAAA LLYLVRFAVS LAYSQLLVRD RLLPRWLWLL PLRDALAFAV WALSLLGNRV
RWRGELFQLD NGGKIRSIGK RGQAGF
|
|---|
| |