| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_0867 |
|---|
| Symbol | |
|---|
| ID | 8136188 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | + |
|---|
| Start bp | 1031431 |
|---|
| End bp | 1033782 |
|---|
| Gene Length | 2352 bp |
|---|
| Protein Length | 783 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 644868483 |
|---|
| Product | polyheme membrane-associated cytochrome c |
|---|
| Protein accession | YP_003020692 |
|---|
| Protein GI | 253699503 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 82 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAAAA AGGTATTCAA GTATTCGGCC GTAATCGCTT CACTACTGAT GACCGCGCTG
TTCGCCGGCT GCGGCACCAG CCACAAGGAG GGGAATCTCA CGGCCGGCAA TGTGGCAAAG
GTCGATGAAA GCCTATGTGC CCAGTGCCAC GGCAGCGCCC GTGAAAAGCT TACTGGACGA
GTGATTTACG ACGACTACAA AGATTCCGTC CACGCCCTGC AGCAGATCGG CTGCCAGGAC
TGTCACGGCG GCGGCGCACA GCATAACGGC GTGGGGCCCA TTCCGTTCCC CAAACCCGAT
GCTGCGCAGT GCGCAACCTG CCACGATGAC GAAGGGCTGG TAACAGCGCA CATCGCTTCC
AAGCATGCCA ACGCCGAAAC CGAGGACGGC CGGGCAAAGT GCAATCGTTG CCATACTCAC
GAAGGTGCAG TTCTCTCCGC CCAGTTTGGC TTCACCGGCG ACGGTACTGT GATAGCCGCC
ATGGTCAACG CCCCCGGCGT GATCACCGAT CCTCAGCCGA TCAAGTGCAA CACCTGCCAC
ATGACACACA AGCCGCAGGA ACTGCGCATC GATGCCGGCT GGGCGCCCAG CGCCACCGTA
GGCATCGCCG ACAATACCGG CAGCGACCAG TACAAGCTCT GCACCCAGTG CCACACCTAC
ATCAACCCCA CCGGTGATCT CACCGGCTCA GGCTCTGCAG TTTCGGGCAC TGTACAGGTT
GGCTATCACA ACACGACCTG GAACAGGGTC ATAGCCTCCA CCCACTACGA CGATCCGGCA
ACCCCCGGCA CCAGTGCAGG CGGCATCGAG GGGTACGTGA TTCGTACCAA AGGTGGCGAT
TCCTGCTTCG ATTGCCACGG CCATGAGTCC AAAACCAACA CCAACAAAAC CGCTGCTGCA
GATGCAACCG TTCACAACGA GTGGGCCAAG TCCGGCCATG CTGGCGGCAT CCTCAAAGTC
AAACTGCAGG CTGCTACCGA CAATCCGGTA GACACTACGC TGCCCAGAAC GGATCCGGTG
CGTGTACAGC AGGGGCTTGA CCAGGTAGAT GCCGTCATGG CTGCTAAAGT TACCGACGTC
GAAGCGCAAG CCTGGAACCA TTACAACTGG GACGATACAT CTACCCGCGG CGGTTGCCAG
AAGTGCCACA CCTCTACCGG TGCTGCCAAC TACATGACCG CACCGACCAC CTACGCTGCG
GCTAACAACA ACTTCTCGCA CCTCTCCAAC TGGAACGCCG TTGGTGGCTC CACCCAGAAC
GAGGTCCTCT ACTGCTGGGG CTGCCACACG AATGCCGGCA CCGGCGACCT GCGCACCCCG
GGCGCCATCA AGGCCGACTA CAAATTCCAG GGAACCCTGG CGCAGTACCC GGACGTGAAA
GCTTCCAACG TCTGCATCTC TTGCCATGTC GGCCAGGCTA GCGGCAACAG CATCACCGAC
CTGACCGTAG CCGCCAACGA CTTCACCAAC GTTAGCTTCG TCAACTCCCA TTACATGGCA
GCCGCAGGCC TCATGTACGT GAAGATCGGC TACACCAACT TCGTACCTGC CGACACCCAG
GTTCCAGGCA CCACCGGCAC CGGCATCGTT TCCTACGGCC AGACCTTGAC CTCCACCTCC
GACGACACCG TCGATGTAGA CGGCGCTGCC GTCAAGGGCA AGCTGAGCTC TACCCACCGC
AAGCTCGGCA CCAGCGCCAT CAATGGCGAC AGCCACAACA CGGCCTTCTT CGTCGCCGGC
AATCTTGACT CCGACGGCCC GTGCGTTACC TGCCACTACG CCGCAGGCGA TCACACCCTG
GAGATGGAGC AGAAGGCTGT CGACGGCGTC TGCTCCAAGT GCCATGAGGT CAGCACCGTT
GCAGAGCTGG AGGAATTCAT CGAGGAGGAA GGGGCTGTTC CGTTCGAAAA CGCCATCGAC
CTCGCTCTCA AGGCGCTGAA GGACAACTAC AACATCAGCT ACAACCCGGC CGCCTATCCG
TACTTCTACG ACGACAATAT CGGAACCGCG GCGAAAGACT GGACCCGCGG CGGTGCTCTC
ACCGCTGCCG AGGCTGAGAA GCTGATGGGG GCCTGCTTCA ACATCAACGT GCTCAAGCGC
GATCCGGCGG CGCATGCCCA CGCTCGCACC TACGCCCGCA GGCTGCTCTA TGACAGCATC
GACTTCCTCG ACGACAAGAC CATGAACCTC TCCACCGGAG CCACCGCGCT TGCTTCACTC
ATGAAGGATT CTGGCGGCGC AGACATTTAC ACCAAGGGGG CCGACTCCAG CACCGGAACC
ACCGAAAGCT TCAAGTATCT GGCTGGTTAC AACCGTACCA CCCACGCATG GAACGCCTCT
GAACGTCCGT AA
|
|---|
| Protein sequence | MSKKVFKYSA VIASLLMTAL FAGCGTSHKE GNLTAGNVAK VDESLCAQCH GSAREKLTGR
VIYDDYKDSV HALQQIGCQD CHGGGAQHNG VGPIPFPKPD AAQCATCHDD EGLVTAHIAS
KHANAETEDG RAKCNRCHTH EGAVLSAQFG FTGDGTVIAA MVNAPGVITD PQPIKCNTCH
MTHKPQELRI DAGWAPSATV GIADNTGSDQ YKLCTQCHTY INPTGDLTGS GSAVSGTVQV
GYHNTTWNRV IASTHYDDPA TPGTSAGGIE GYVIRTKGGD SCFDCHGHES KTNTNKTAAA
DATVHNEWAK SGHAGGILKV KLQAATDNPV DTTLPRTDPV RVQQGLDQVD AVMAAKVTDV
EAQAWNHYNW DDTSTRGGCQ KCHTSTGAAN YMTAPTTYAA ANNNFSHLSN WNAVGGSTQN
EVLYCWGCHT NAGTGDLRTP GAIKADYKFQ GTLAQYPDVK ASNVCISCHV GQASGNSITD
LTVAANDFTN VSFVNSHYMA AAGLMYVKIG YTNFVPADTQ VPGTTGTGIV SYGQTLTSTS
DDTVDVDGAA VKGKLSSTHR KLGTSAINGD SHNTAFFVAG NLDSDGPCVT CHYAAGDHTL
EMEQKAVDGV CSKCHEVSTV AELEEFIEEE GAVPFENAID LALKALKDNY NISYNPAAYP
YFYDDNIGTA AKDWTRGGAL TAAEAEKLMG ACFNINVLKR DPAAHAHART YARRLLYDSI
DFLDDKTMNL STGATALASL MKDSGGADIY TKGADSSTGT TESFKYLAGY NRTTHAWNAS
ERP
|
|---|
| |