| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_0609 |
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| Symbol | |
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| ID | 8135924 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | - |
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| Start bp | 739107 |
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| End bp | 741014 |
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| Gene Length | 1908 bp |
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| Protein Length | 635 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644868226 |
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| Product | general secretion pathway protein D |
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| Protein accession | YP_003020441 |
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| Protein GI | 253699252 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1450] Type II secretory pathway, component PulD |
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| TIGRFAM ID | [TIGR02517] general secretion pathway protein D |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 9.73081e-17 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGGATTTG CTCGCATCAC AGCCATGCTC ATGTTCCTGC TCGCCGCACC GACGCTGGTC
TTCGCCAAGG GTGTGGTGCT TAACTTCACC GACGTGGATA TCGCCACCAT GGTGAAATTC
GTCAGCGACC TGACCGGGAA GAACTTCATC ATGGACGACC GGGTGAAGGG AAAGATCTCG
GTGTTCTCCC CGGCCAAACT CTCCAACGAC GAGGCGTACA ACGTCTTCAC CTCGGTCCTG
GAACTCAAGG GGTTCACCGT GGTCCCGGCG GGAAAGGTGC TGAAGATCGT TCCCACGGCG
AGCGCCAGGC AGTCGGGGAT GAAGGTCCTC TCCGAGGGTG AGCGGGGGGT AGTGAACGAC
AGCTATCAGG CCCGCGTGAT CCAGCTGGAG CACGTGGCAC CTCAAGAAGC CGTCGCTTTC
CTGCAGCCGC TTGTCTCCAG AGACGGCCAG ATCTCACCTT TCGGCGCGGC GAACATGATC
CTCGTGGTCG ACTCCGCATT CAACATCCAG AAGGTATTGG GGATCCTCAA GCACATCGAC
ACGGACCAGG TGCGCGAGGG GGCCGAACTG GTCTTTCTTA AGAACGCCGC CGCCGATAGC
GTGGCGACGC TGGTTAAGGA CTGGATGGGC GGCAAGTCAT CTAAGCTGCC CGGCGCGGCA
GCCACAAACG CAAGCTCCAC CGTCGTCGCC GACAACAGGC TGAACGCTCT GATCATCTTC
GGCAGCGACA AGGACAAGGC CGACGTGAAG AAGTTGATCG CGCTGGTAGA CGTGGTCCCC
CCCACCACCA GCAGCAAGGT CAACGTCTAC TACCTTGAAA ACGCCGAGGC CGCCGAGGTC
GCCAAGGTGC TGGACGGCCT TTTGAAGGGT ACGGCGGCCA CGCCGGCGCC CGTAGCCGGC
GCTGCCGCGA CGGCTCCGCA ACAGGCCATC TTCGAGGGGG GGAAGATCAC CATCACCCCG
GACAAGTCGA CCAACTCGCT GGTCATCATG GCCTCCCCCA CCGATTACCA GAACCTCTTG
CAGGTGATCC AGAAGCTTGA CCGCCGCAGC CGCCAGGTCT TCGTGCAGGC GATGATCGCC
GAGGTCTCCG CCAACAAGGC GAAGGAACTG GGCGTGCAGT GGGGCGTGAT CGCCGGAGCC
TCCAACGGCA CGCTCTCGAC GGTCGGCACC TTCGATCCCT TCGGCGCCGT GGCCGGCCTG
AGCGGCGCCT TGCAACTCGC CGACACATTG GGAATCACAC CACCGGACGG CGGAGTGGCC
CTGTTCCCCG CAACGCTCAA GGCGCTGCAC AGTAACGGTG CGCTGAACGT CCTGTCCACC
CCGAACATCA TGACCAGCGA CAACAAGGAA GCCGAGATCT TCGTGGGGGA GAACGTCCCC
TTCCTCTCCG GTACCAACCT CACCTCCACG GGGCTCTCCC AGCAGTCGAT CGAAAGGAAA
GACACCGGTA TCATCCTGAA GATCAAGCCT CAGATCAGCG AGGGCGAATA CATAAAGCTC
GACATCTACC AGGAGATCTC GGCGGTGAAG GACTTCGGCA CCGCCACGAA CCCGAACCTC
GGTAGCACCA AGCGCTCGGC CAAGACCTCG GTGGTGGTGA AGAACACCGA CACGGTCATC
ATCGGCGGAC TGATTCAGGA CACCGACCAG GTGACGGAGA GCAAGATCCC GCTTCTGGGC
GACATCCCGC TCCTGGGGTG GCTTTTCAAG ACCAAGCGGA CAACGCGGGA CAAGACCAAC
CTCCTGATCA TGCTCACCCC GCGCATCATC AAGGACGCGC GCGACATGGC CGAGGTTTCC
ATCAACCAGC GAAACAGCTT CAGCGACGCG GTGAAGACCA GCGAGCCGAT CAACATGGAG
CAGGCTCTCA AGGAAAAGCC AAAGTCGGTG ACCGAGGACA AGCCCTAA
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| Protein sequence | MGFARITAML MFLLAAPTLV FAKGVVLNFT DVDIATMVKF VSDLTGKNFI MDDRVKGKIS
VFSPAKLSND EAYNVFTSVL ELKGFTVVPA GKVLKIVPTA SARQSGMKVL SEGERGVVND
SYQARVIQLE HVAPQEAVAF LQPLVSRDGQ ISPFGAANMI LVVDSAFNIQ KVLGILKHID
TDQVREGAEL VFLKNAAADS VATLVKDWMG GKSSKLPGAA ATNASSTVVA DNRLNALIIF
GSDKDKADVK KLIALVDVVP PTTSSKVNVY YLENAEAAEV AKVLDGLLKG TAATPAPVAG
AAATAPQQAI FEGGKITITP DKSTNSLVIM ASPTDYQNLL QVIQKLDRRS RQVFVQAMIA
EVSANKAKEL GVQWGVIAGA SNGTLSTVGT FDPFGAVAGL SGALQLADTL GITPPDGGVA
LFPATLKALH SNGALNVLST PNIMTSDNKE AEIFVGENVP FLSGTNLTST GLSQQSIERK
DTGIILKIKP QISEGEYIKL DIYQEISAVK DFGTATNPNL GSTKRSAKTS VVVKNTDTVI
IGGLIQDTDQ VTESKIPLLG DIPLLGWLFK TKRTTRDKTN LLIMLTPRII KDARDMAEVS
INQRNSFSDA VKTSEPINME QALKEKPKSV TEDKP
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