Gene GM21_0602 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_0602 
Symbol 
ID8135917 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp733884 
End bp734489 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content63% 
IMG OID644868219 
ProductN-terminal methylation protein 
Protein accessionYP_003020434 
Protein GI253699245 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4795] Type II secretory pathway, component PulJ 
TIGRFAM ID[TIGR01711] general secretion pathway protein J
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.00000000162543 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGCAATA ACAGGGGGTT CACCCTCATC GAACTCCTGA TCGCGCTGGC GCTTTTGGTG 
ATCCTCACCG GCGCCCTGTA CGGCACCTAT TTTTCGGTGG TGGCCGCGCG GGAGAAGGGG
GGCAAAAGGA TGGAGCAGCG CCGGGAGCTC TCCACTACGC TCGGCAAGCT GCACGACGAA
CTCTCCTCCT GCTTCTTCAA CACCAAAAAC GCGAGGCTGC ACTTCGTGGT CGAGGACCGG
GACAGCTTCG GCAAGCCCGC CTCGCTTTTG CAATTCACCG CCGTCGCCCC CCCCCGGATC
GACCCTGCGC CCGCTTCCGA CATCGTGGTG GTGCGCTACT CGGTGCAGGA AAAGGATGAA
CAGCAGACAC TTTCGCTGCA GCGCGAAGCG CGCGATCCCT ACCTCGACGT CAAGGTGAAG
TCCGCCCCCT ACCCGGTGGT GGACGATATC GACGGTTTCC TGGTCGAGTG CTGGGACGGG
AACAAGTGGG TGAAGAGCTG GGACACCGCG CTGAACGGTT TCCTGCCCAA ACAAGTGCGG
GTCACCCTCA CGCTCAAGGG GGGCGAGGAG TTCAGCACCA TCGCCTCGCA GAGGCTCACG
CGATGA
 
Protein sequence
MRNNRGFTLI ELLIALALLV ILTGALYGTY FSVVAAREKG GKRMEQRREL STTLGKLHDE 
LSSCFFNTKN ARLHFVVEDR DSFGKPASLL QFTAVAPPRI DPAPASDIVV VRYSVQEKDE
QQTLSLQREA RDPYLDVKVK SAPYPVVDDI DGFLVECWDG NKWVKSWDTA LNGFLPKQVR
VTLTLKGGEE FSTIASQRLT R