| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_0479 |
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| Symbol | |
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| ID | 8135788 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | + |
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| Start bp | 588126 |
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| End bp | 588890 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644868097 |
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| Product | Rhomboid family protein |
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| Protein accession | YP_003020317 |
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| Protein GI | 253699128 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0000000000000451425 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTGGTGCG GTGCACCGCG CCCGAGCTTC GGCGCCAGGT TCAGAGAAAT GCTGCGCGGA
GGGCTCGATG CCGGCCTGGT GGTGCAGGGG ATCATCGCCG CCAACGTGCT CTTCTATCTC
CTCTCGCTGC TTTTGAGCGG CAGGCGCGGG TTCGACATGA ACCCCCTGAG CTTCATGTCG
CCGGACCAGA ACAGCTTGCT GCTGCTGGGC GCCACGGGCA CGATACCGGT GCTGGAGCTT
GGGCGCGTGT GGAGCCTCAT CTCCGCCAGC TACCTGCACG GAGGGCTGCT GCACATACTT
TTCAACATGA TGGCGCTGCG CCAGATCGGC CCCTGGGTCA GCGCGGAGTT CGGCGCGAGC
CGCATGTTCG TCATCTATAC CTTGAGCGGC GTTGCCGGCT ACGTCGCCTC CTTCTTCGCC
GGGATCCCCT TCACCATCGG CGCTTCCGCC TCCGTTTGCG GCCTGATCGG CGCCCTTTTC
TATTTCGGCA AGAGCCGCGG CGGCAATTAC GGAGCGGCCG TCTCCCGCGA GGTGAGCGGC
TGGCTGATCA GCCTGGTCCT CTTCGGCTTG ATCATGCCCG GCATCAACAA CTGGGGGCAT
GGCGGCGGCG TGGTGGGGGG GATCGTGCTG GCGAAACTTT TCGGGTACGA GGAGCGGAGC
CGCGAGAACA GCGCGCACCG CCTGCTCGCG CTGATCTGCC TCGTCGCCAC CGTGGCCGTC
CTTTGCTATG CAGCCTATTT TTCTCTCGCC TACCGCTTCA AGTGA
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| Protein sequence | MWCGAPRPSF GARFREMLRG GLDAGLVVQG IIAANVLFYL LSLLLSGRRG FDMNPLSFMS
PDQNSLLLLG ATGTIPVLEL GRVWSLISAS YLHGGLLHIL FNMMALRQIG PWVSAEFGAS
RMFVIYTLSG VAGYVASFFA GIPFTIGASA SVCGLIGALF YFGKSRGGNY GAAVSREVSG
WLISLVLFGL IMPGINNWGH GGGVVGGIVL AKLFGYEERS RENSAHRLLA LICLVATVAV
LCYAAYFSLA YRFK
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