| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_0452 |
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| Symbol | |
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| ID | 8135761 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | - |
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| Start bp | 545432 |
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| End bp | 548299 |
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| Gene Length | 2868 bp |
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| Protein Length | 955 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644868070 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_003020290 |
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| Protein GI | 253699101 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 95 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCAAA AGTTAGTCAA AAACGGAGGG CTTGCCCTCC TCATCCTTGC CTTCACCTGT
CTGTGCACGT CCATCTTCTA TTTCTCCTAC CAAAAGGCAA AACAATCGGC CATCAACAGG
CTGAACGACG AGCAGTTCAC ACATGCCAAG CAGGCGGCCA GGGGGATCGA AGAACACTTC
GTCACCTGGA CCGGCATCCT CACCTCGCTT GCGAAGCTCG ACTCCGTCGT CGCCATGGAT
CCCGACGGCA AGCGCCAGAT GGAATTCTTC TACGACGCCC ACAAGGACCA GATCAGATCG
TTCACCCGGA TGGACGAGAA GGGGAACATA CTCTTCACCG TTCCGGATCT GAGAATGGCG
GGAAGGAACA TCACGGGGCA AAAGCACATA CAGGAACTGA TCGCGACGCA AAAGCCTGTG
GTGAGCGACG TCTTCCGGAC CATCCAGGGG TATGACGCCA TCGCCCTTCA CGTTCCGGTC
TTCGATGGAC TCCGGTTCAG GGGTAGCATC GCCATCATCA TCAACTTCCA GAGCCTCGCC
CAGCGCTACC TCGAGGTAAT CAAGATCGGC AAGACCGGCT ACGCCTGGGT GGTAAGCCGG
GACGGCACCG AACTCTACTG CCCCGTCCAC GGCCACAGCG GCAAGAGCGT TTTCGCCACC
GCGAACGAGT TTCCGGCGGT TCTCGCCATG GTAAAGGCGA TGCTCAAAGG GGAATCGGGG
ACGGCGAGCT ACGACTTCAA CACGAGGGGC GGCGCCTCCG CCAAATCTGT AAAGAAACAT
GCCGTCTACC TTCCCATCAA CCTCGGCAAC ACCTTTTGGT CCATCGTCGT CGTTTCGTCG
GAGCAGGAGA TTCTCTCCTC GCTTTCCTCC TACCGCAACA GGCTGGCTCT GGTCTTCGGC
GGCATCCTGC TGGGTGGGAT CATCATCTGC ATCCTGGTGC TACGGGCCCT GCTGATAGTG
AGGGAGCAAG CCGTGCACAA GGAAGCGGAG GCGGAGTTGC GAGCCAGCGA GCAGAGGTAC
CGCTACCTCT TCGAGCAAAA TCCCGCCCCG ATGCTCATCT ACGAAAGGGG AACCATGCAG
ATGCTGGCGG TGAACGACGC CTTCGCCGTC GGCTACGGCT ACAGCAACGA GGAAGCGCTG
GCGCTTGGGC TCACCGACCT CTACCCCGAG GAGGAGAAAC AGAAGATCAC CGAGGTCGCC
GCCGGGCTCA GCGGCCACAC CTATGTCGGG GAATGGCACC ACCGCCGCAA GGACGGCACC
GTCTTCCCCA TCGTTGTCAC CTCCCACGAC ATGACCTACG GAGGCAGGAC CGCTCGCATC
GCGGTCATCA CGGACATAAC GGATCGTAAG GCGATGGAGA AGGCAATCGA GGAGGAGTCG
ACCTTCAACC GCCTCCTTTT AGAGCATTCG CCCGACGGCA TAGTCATCAT CGACCCGAAG
ACCGCCCGCT TCATCAACTT CAACGCCGCC GTCTGCCGGC AACTCGGGTA CTCCCGCGAG
GAGTTCGCCC AACTAAGCGT CTTCGATATT GAGGCCGTGG AGACACGGGA AGACACCCGC
CGCCGCATCG AGGGTATCGT GCGGGAGGGA CGGGGCGACT TCGAGACCAT GCAGCGGACC
AGTCAGGGAG AGCTACGAAA CGTCCAGGTG ACAGCGCAGA TCCTGACCAT CCAGGACCAA
CAGGTCTACT ACTGCATCTG GCGCGACATA ACCGAGCACA AGAAGCTGGA GGAGCAGTTA
AGGCAATCGC AGAAGATGGA ATCGGTGGGA CGGCTGGCGG GGGGAGTCGC CCACGACTTC
AACAATATGC TCGGCGTGAT CATCGGGTCC GCCGACCTCT GCCAGCACCA GGTACCGGCG
GATAGCCCGC TGCAAAAGTA TCTCGATCAC ATCCTGAAAG CGGCGAAACG GTCGAGCGAC
ATAACGCGCC AGTTGCTCGC TTTCTCCCGC AAGGAGGTAG TTTCGCCCAA GCCGGTGAAC
CTTAACAGCC TCATCATCGA CTCCGAGAAG ATGCTCTGCC GTTTGATCGG CGAGGACGTC
AAGCTCACCT TCAAACCCTC CACCGGCCTT TGGACCGTGA TGATCGACCC GGCCCAGTTC
GACCAGATAC TCATGAACCT CTCCGCCAAC TCCCGCGACG CCATGCCCGA CGGCGGCACG
CTCGACATAG CGACCGGCAA CGTTCACCTC GACGCAGGCT ACTGCCGCCA CCACTCGGAC
ACCGTTCCCG GCGACTACGT CAAGATCACC GTCTCCGACA CCGGGACGGG GATGAATCGC
GAAACCAGGG ATCACATCTT CGAGCCCTTC TTCACCACCA AGGGGGTCGG GGTAGGGACC
GGTCTCGGTC TCGCCACGGT CTACGGCATC GTCACCCAGA ACAACGGGTT CATCAACGTC
TACAGCGAGC TTGGCCAAGG GTCGGTCTTC AACATCTACC TGCCGCGCCT TTTGGAAGAT
GGCGCGACAG AGGAAGAGGC CGAGGCGGCG CCCCCCCCGA AAGGAACCGG AACCATCCTC
CTGGTCGAGG ACGAGGAGAT GCTGCTCTGG ACCACGACGA AAATCCTGGA GGAGATGGGT
TATACCGTGC AGCAGGCCGA ATCCCCGGCA AAGGCGATAG CGATCTGCGA AAACGGCAAA
CAGATAGACC TGGTGCTGAC CGATGTGGTG ATGCCCGGCA TGAACGGCCG GGAGATGGTG
GACAGGATAA GGAGCGCCAG GCCTGACATA AAGGTGCTGT TCATGTCCGG CTATACAGCG
GATATAGTGG CCCAGCGGGG AATCGTGGAA GAAGGGATGT TCTACATCTC CAAGCCGTTG
GATTCCAAAC AGTTGCACGA GAAGATCGTC CAGACGCTGG CGTCGTAG
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| Protein sequence | MIQKLVKNGG LALLILAFTC LCTSIFYFSY QKAKQSAINR LNDEQFTHAK QAARGIEEHF
VTWTGILTSL AKLDSVVAMD PDGKRQMEFF YDAHKDQIRS FTRMDEKGNI LFTVPDLRMA
GRNITGQKHI QELIATQKPV VSDVFRTIQG YDAIALHVPV FDGLRFRGSI AIIINFQSLA
QRYLEVIKIG KTGYAWVVSR DGTELYCPVH GHSGKSVFAT ANEFPAVLAM VKAMLKGESG
TASYDFNTRG GASAKSVKKH AVYLPINLGN TFWSIVVVSS EQEILSSLSS YRNRLALVFG
GILLGGIIIC ILVLRALLIV REQAVHKEAE AELRASEQRY RYLFEQNPAP MLIYERGTMQ
MLAVNDAFAV GYGYSNEEAL ALGLTDLYPE EEKQKITEVA AGLSGHTYVG EWHHRRKDGT
VFPIVVTSHD MTYGGRTARI AVITDITDRK AMEKAIEEES TFNRLLLEHS PDGIVIIDPK
TARFINFNAA VCRQLGYSRE EFAQLSVFDI EAVETREDTR RRIEGIVREG RGDFETMQRT
SQGELRNVQV TAQILTIQDQ QVYYCIWRDI TEHKKLEEQL RQSQKMESVG RLAGGVAHDF
NNMLGVIIGS ADLCQHQVPA DSPLQKYLDH ILKAAKRSSD ITRQLLAFSR KEVVSPKPVN
LNSLIIDSEK MLCRLIGEDV KLTFKPSTGL WTVMIDPAQF DQILMNLSAN SRDAMPDGGT
LDIATGNVHL DAGYCRHHSD TVPGDYVKIT VSDTGTGMNR ETRDHIFEPF FTTKGVGVGT
GLGLATVYGI VTQNNGFINV YSELGQGSVF NIYLPRLLED GATEEEAEAA PPPKGTGTIL
LVEDEEMLLW TTTKILEEMG YTVQQAESPA KAIAICENGK QIDLVLTDVV MPGMNGREMV
DRIRSARPDI KVLFMSGYTA DIVAQRGIVE EGMFYISKPL DSKQLHEKIV QTLAS
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