Gene Franean1_7322 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_7322 
Symbol 
ID5675623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp8952153 
End bp8952578 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content72% 
IMG OID641246159 
ProductNUDIX hydrolase 
Protein accessionYP_001511547 
Protein GI158319039 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.131759 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.605436 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGGAGA CCTCGGCCGG GGGCCTCGTG CTCGACACCG CGTCCGCCGC CGCGAACGCG 
GCGCTGATCG CCCGCAGGGA CAAGCGTGGC CGGCTGTTGT GGTCGCTGCC GAAGGGTCAT
GTCGAGTGCG ATGAGACCAC GGAGGAGGCC GCCGTCCGAG AGGTCGCCGA GGAGACCGGT
GTGACCGGAG CGGTTCTGGG CCCGCTGGGC ACGATCGACT TCTGGTTCGT CGCCGGCGAG
GCTCGCGTGC ACAAGACCGT CCACCACTTC CTCCTGCTCC GGACGTCGGG CGACCTCTCC
GACGACGACG TCGAGGTCGC GGAGGTCGCG TGGGTCCCGC TGCCCGAGGT GGCGCGACGG
CTCGCGTACG CCGACGAACG ACGGCTGCTC GACGGGGTGC CGACGATCCT CGCCGACGCC
TCGTGA
 
Protein sequence
MEETSAGGLV LDTASAAANA ALIARRDKRG RLLWSLPKGH VECDETTEEA AVREVAEETG 
VTGAVLGPLG TIDFWFVAGE ARVHKTVHHF LLLRTSGDLS DDDVEVAEVA WVPLPEVARR
LAYADERRLL DGVPTILADA S