Gene Franean1_7147 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_7147 
Symbol 
ID5675450 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp8728474 
End bp8729070 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content69% 
IMG OID641245986 
ProductNUDIX hydrolase 
Protein accessionYP_001511374 
Protein GI158318866 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0778185 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGCCCGA CCAGGGAACC GGGAAGTTGC CGCTCCCGGA CGGGCGCCGA CCGAATATGG 
TCGTGCGCCA TGCGGAACTC GTTCTGTTCG TCCTGCGGCA CGAAATACCA GCCTGATGTG
GCGTGGCCGC GGGTGTGCAC TGGCTGCGGT GAGACAACGT GGCTCAATCC GCTTCCGGTG
GCGGTGGCGT TGTTGCCCGT CGTGGAACCT GACGGCGGAC GCGGTCTGGT GGTGGTGCGC
CGCGACATTG ACCCCGGCCG TGGCGAGCTG GCGCTGCCCG GCGGTTTCAT GGAGCTGGAC
GAGGCCTGGC GCGACGCTGT CGTTCGGGAG CTGAGCGAGG AGACGGGAAT CATCGAGCAG
GCGGCGGATG TCCGCCTGTT CGACGTGCAC AGCGGGAACG ACGGCCGGTT CCTGCTGGTG
TTCGGCCTCC TGCCGGAACG GCGTTGGGCC GAGCTACCGC CGGTGATCGC GACGAACGAG
ACGACCGAGT GGCTGGTCGT CACGGAGCCG CGGCAGCTCG TGTTCCCGAC CCATACCGAC
GCGATGGCCT CCTACTTCGC CCGGATCCGG GGGCAGGTGC CGGCCTCCGC TTCCTGA
 
Protein sequence
MGPTREPGSC RSRTGADRIW SCAMRNSFCS SCGTKYQPDV AWPRVCTGCG ETTWLNPLPV 
AVALLPVVEP DGGRGLVVVR RDIDPGRGEL ALPGGFMELD EAWRDAVVRE LSEETGIIEQ
AADVRLFDVH SGNDGRFLLV FGLLPERRWA ELPPVIATNE TTEWLVVTEP RQLVFPTHTD
AMASYFARIR GQVPASAS