| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_7058 |
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| Symbol | |
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| ID | 5675794 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 8612042 |
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| End bp | 8612860 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641245903 |
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| Product | shikimate dehydrogenase substrate binding subunit |
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| Protein accession | YP_001511294 |
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| Protein GI | 158318786 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.228193 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAGGA TTATCGACAA GGACACCCGG CTGTGCATGT CGCTCGCCGG CCGGCCGGGG
AACTTCGGCA CCCGGTTCCA CAACTTCCTG TACGACGAGC TCGGGCTGAA CTTCGTCTAC
AAGGCCTTCA CCACCGACGA TCTGTGTTCG GCCATCGGCG GTATCCGCGC ACTGGGGATC
CGGGGGTGCG CCGTTTCGAT GCCGTTCAAG GAGGCCAGCA TCGAGCTCGT CGACGAGCTG
GCCGACTCGG CCGCCGCGAT ACAATCCATC AACACGATAG TCAACGAAAC TGGGCGGCTG
CTGGCGTACA ACACCGACTA TATTGCCGTC TCCCGCCTGC TCGCCCAGTA TCAGGTGTCA
CCGGACCACA CCTTTGCGCT GCGGGGAAGC GGCGGTATGG CGAAGGCCGT TGCCTGCGCC
ATACGCGATG CTGGGTTCCG GTCCGGCTGT GTCGTTGCCA GAAACGAGGC GACCGGCCGG
GCGCTGGCGG AGATGTATGG CTACGAGTGG CGGGCCGATC TGGGATCGCT GCGGCCGGCG
CTGCTCGTCA ACGTCACCCC GATCGGGATG TCCGGCGGCC CGGAGGCGGC CGATCTCGCG
TTCGAACTCG CCGCCGTCGA CAAGGCCGAG GTTGTCTTCG ACGTGGTCGC CGTTCCCGCC
GAGACACCGC TCATCCGCTG TGCACGGGAG CGCGGCAGAA CAGTGATCAC CGGGGTCGAA
GTGATCGCGC TCCAGGCACT GGAGCAGTTC GTCCTGTACA CCGGCGTCCG TCCGGACGAC
GACCTGGTAC GCCGAGCGGC TGCCTTCGCG AGGTCATAG
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| Protein sequence | MARIIDKDTR LCMSLAGRPG NFGTRFHNFL YDELGLNFVY KAFTTDDLCS AIGGIRALGI
RGCAVSMPFK EASIELVDEL ADSAAAIQSI NTIVNETGRL LAYNTDYIAV SRLLAQYQVS
PDHTFALRGS GGMAKAVACA IRDAGFRSGC VVARNEATGR ALAEMYGYEW RADLGSLRPA
LLVNVTPIGM SGGPEAADLA FELAAVDKAE VVFDVVAVPA ETPLIRCARE RGRTVITGVE
VIALQALEQF VLYTGVRPDD DLVRRAAAFA RS
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