| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_7006 |
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| Symbol | |
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| ID | 5675317 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 8542685 |
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| End bp | 8544367 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641245852 |
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| Product | PepSY-associated TM helix domain-containing protein |
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| Protein accession | YP_001511243 |
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| Protein GI | 158318735 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3182] Uncharacterized iron-regulated membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.103084 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.241919 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCACGA TCGACCAGGC GGGGCTGCCC CCCGACGACC AGACCACCCC TCCCGCCGAC
CTGACCACGC ACGCTGCCGA CCCGGCCACG CACGCTGCCG ACCCCGCCGC GACGCCGGGC
GTCCCGGAAC CACGGCAACC TGACGCTCCC GACGCGTCCG TACCCGACCC GTCGTCTCCT
GGCACGTCGC CCACTGGCAC GTCGTCCACT GGCACGTCGT CCGCCGACAC GTCGAGTTAC
CCGCCCGTGT CGACGTCCGG TGGAGGGCGG CTGCTGCTGC TGCGGCTGCA CTTCTACGCC
GGGGTGCTGG TCGCGCCGTT CCTGGTGGTC GCCGCGCTCA CCGGTCTCGC GTACACGATC
ACCCCGCAGC TCGACCGGCT GGTCTACGCG GACGAGCTCT ACGTCGACCA GGCCGGCCCG
GCGCCGCGGC CCCTCGCCGA GCAGGTCAAC GCCGCGCTCG CCGCCCATCC CGAAGGCACC
TTCAGCTCGG TGCTCACCGG AGACGCGCCC GACCGGACCA CCCGGGTGGT CCTGAACGTT
CCCGACCTGG GCGACAGGCA GCGCACCGTC TACGTCAACC CGTACACGAG CCGGGTCCAG
GGCGAGCTGA CCACCTGGTG GGGCAGTACA CCACTCACCA CCTGGCTGGA CGACCTGCAC
CGCAACCTGC ATCTCGGCGC GTTCGGCCGG CACTACTCGG AGGTCGCGGC GAGCTGGCTG
TGGATCATCG CCCTCGGTGG CCTGGTGCTG TGGCTGGGCC GGCGCCGCCG GGCCCGCCGG
GTGCGCCGGG TCCTGTTGCC CGACCTCACC GCCCGCGGGC GACGACGCAC GATGGCCTGG
CACGGCAGCC TCGGCGTCTG GCTGCTCATC GGCCTGCTGT TCCTGTCCGC AACCGGTCTG
ACCTGGTCTC GCTACGCCGG GGCGCACTTC TCCTCCGCCC TGGACGCCGC CGACAGCCAC
ACCCCCGATC TCGACACCGC CCTGCCCCGG GCTGCCCCCG CGGGCGGCAT CGGTGGGATC
GGTGGGAGCA GCGGGATCGG TGGAGAACAC GAGGGCCACA CCACCGCCGG TGCCACCGAG
ACCAGTTCCT CGGACGCGGC AGGTGTGGAC AAGGTGGACC GGATCATCGC CGCCGCGCGC
GGGGCGGGCC TCGACGGACC CGTTGAGATC ACACCACCGG CCGAGGCCGG CACGGCGTGG
ACTGTGGCCC AGACCGACCG GCGCTGGCCG GTACGACTCG ACCAGGTGGC GGTCGACCCG
GCTGACGCCA GGGTGGTCAA CGAGGTCCGC TGGGAGAGCT GGCCGCTGCT CGCGCAGCTC
ACCAAGATCG GCATCGCCGC GCACATGGGC GAGCTGTTCG GGGTGGCCAA CCAGATCCTG
CTGGCCAGCC TCGCGGTCGG CCTGGTCTGC GTGATCGTCT GGGGCTACCG GATGTGGTGG
CAGCGCCGCC CCACCCGAGC GGACCATGCA GGCATCGTCG GCCCGGCCCC CGCACGGGGC
ACCTGGCGGC GGGTACCCAG GCCCGCGCTG GTCGCCCTGG TCCTGGTCAC CGCCGCGGTC
GGCTGGGCGC TGCCCGTGCT CGGAGTGACT CTCCTGGCCT TCCTCGCCCT CGACGCGACC
GCCGGGCTGG TTCGCGGCCG GCGCCGCCAA CGGACGGACG GGACCCCCGC CCAACCGGCG
TGA
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| Protein sequence | MTTIDQAGLP PDDQTTPPAD LTTHAADPAT HAADPAATPG VPEPRQPDAP DASVPDPSSP
GTSPTGTSST GTSSADTSSY PPVSTSGGGR LLLLRLHFYA GVLVAPFLVV AALTGLAYTI
TPQLDRLVYA DELYVDQAGP APRPLAEQVN AALAAHPEGT FSSVLTGDAP DRTTRVVLNV
PDLGDRQRTV YVNPYTSRVQ GELTTWWGST PLTTWLDDLH RNLHLGAFGR HYSEVAASWL
WIIALGGLVL WLGRRRRARR VRRVLLPDLT ARGRRRTMAW HGSLGVWLLI GLLFLSATGL
TWSRYAGAHF SSALDAADSH TPDLDTALPR AAPAGGIGGI GGSSGIGGEH EGHTTAGATE
TSSSDAAGVD KVDRIIAAAR GAGLDGPVEI TPPAEAGTAW TVAQTDRRWP VRLDQVAVDP
ADARVVNEVR WESWPLLAQL TKIGIAAHMG ELFGVANQIL LASLAVGLVC VIVWGYRMWW
QRRPTRADHA GIVGPAPARG TWRRVPRPAL VALVLVTAAV GWALPVLGVT LLAFLALDAT
AGLVRGRRRQ RTDGTPAQPA
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