Gene Franean1_6949 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6949 
Symbol 
ID5675262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp8466491 
End bp8467927 
Gene Length1437 bp 
Protein Length478 aa 
Translation table11 
GC content75% 
IMG OID641245798 
Productacyltransferase 3 
Protein accessionYP_001511189 
Protein GI158318681 
COG category[I] Lipid transport and metabolism 
COG ID[COG1835] Predicted acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.270738 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGCACG CCAGCTCGGC CCGCGCCCCA GGCCGTCCCG GAGGCCCGCG CCACCGCAGG 
AAGCGGCACG GATGGCCCTG GGCGCCGCAG GGACCGTGGG GATGGCTGGC GACGCCCGGC
GCGCGGACCC TGGGCCAGGC GTTCGATCCG CGGCACAACA ACCTCAACGC GCTCAGGCTC
GTCCTGGCGG CGACCGTGCT GGTGTCGCAC TCCTGGGGGT TCGTCCGGGA CGAGGACGAC
CCGCTCGGGA AGCTGACCGG CGGGCCGGAG GCGGGCGAGG TCGCCGTGGA CGGATTCTTC
CTGCTCAGCG GCTTCCTGAT CACTCGGAGT CGGCAACGGG CCCGCTCGAC CGGACGTTTC
CTGTGGCACC GCCTGCTGCG GATCCTGCCC GGCTTCTGGG TCTGCCTCGC CGTGACCGCG
GTGATCCTCG GGCCGCTGCT GTGGCTACTC GAACGGGACA CCCTGGCCGG CTATCCCTGG
ACGGGCGCCG ACTCGGCGCT GACCTACGTC GCAGCCAACG CCCTGCTGCG GATGCACCAG
TTCAACATCG GCGACCTCAA CGGCGGCGGC GCGCTCAACG GCTCCCTGCA CACCCTCTTC
TTCGAGGTGC TGTGCTACCT GATGATCGGG GTCCTCGGGG CGATGGGGCT GCTGCGCCGG
CGCCGGGCAG CCGTCCTCGC CCTGGCCGCC GCCTGCTGGG TGCTCGCCGC CGCGGACACC
GTCTCCGGCG CGGACCGCCT CGCCGACGCC TACGCGCTCC GCTTCGCCTC GATGTTCCTC
GTCGGCGCGG TGATGTTCCT CTACGCCGAC CGCATCCCGC TGAACCGGCC GCTGCTCGCC
GCGAGCTGCT GCCTGCTCGC CATCGCCCTC GCGGCTCCCG CCGCCTACCT GCCCCTCGCG
CCCGCGCCGC TGGCCTACTT CCTGCTATGG GCGGGCACCG GACGTCGTCT CATGCGGGTC
GGGAGCCGGC GGGACCTCTC CTACGGCATC TACGTCTACT CGTGGCCGCT GCAGCTCCTC
CTGCTCGAGC TCGGCGTCGG CGACGACAGC GTCGCCGTCA ACATCGTCGC CTCGATCGGC
CTCTCCGCGG CGGTCGCGGT CGCCAGCTGG CACCTCGTCG AATCGCCCGC GCTCGCCCTC
AAGTCGGCGG CGGCGCCGTC CTGGCTGGGA GGGTTCCTCT CCCGGCCCGC GGCACGCCCC
GGGGGACGGC CTACGCGCCC GGCGGACTCG GCGTCCCCGA TGGGCTCACC GTCCCCGATG
GGCTCGGTGC CGGGCGCCGC CGCGGGTGCC GCGCCGGGCG GGCACCGGAC GTACAGCGCG
GTGCCGGGGA TGCCCGTGTC GGCTGGGCCG GTGCGCCCGC CTGGCTCGGA TCCTCTGAGG
CGCTCCCGGC CCGCGGCCGT GCCCGACCAG CGGCGCACCC GCCACGCGTC GAGGTGA
 
Protein sequence
MTHASSARAP GRPGGPRHRR KRHGWPWAPQ GPWGWLATPG ARTLGQAFDP RHNNLNALRL 
VLAATVLVSH SWGFVRDEDD PLGKLTGGPE AGEVAVDGFF LLSGFLITRS RQRARSTGRF
LWHRLLRILP GFWVCLAVTA VILGPLLWLL ERDTLAGYPW TGADSALTYV AANALLRMHQ
FNIGDLNGGG ALNGSLHTLF FEVLCYLMIG VLGAMGLLRR RRAAVLALAA ACWVLAAADT
VSGADRLADA YALRFASMFL VGAVMFLYAD RIPLNRPLLA ASCCLLAIAL AAPAAYLPLA
PAPLAYFLLW AGTGRRLMRV GSRRDLSYGI YVYSWPLQLL LLELGVGDDS VAVNIVASIG
LSAAVAVASW HLVESPALAL KSAAAPSWLG GFLSRPAARP GGRPTRPADS ASPMGSPSPM
GSVPGAAAGA APGGHRTYSA VPGMPVSAGP VRPPGSDPLR RSRPAAVPDQ RRTRHASR