| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6718 |
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| Symbol | |
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| ID | 5675031 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 8161443 |
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| End bp | 8163413 |
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| Gene Length | 1971 bp |
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| Protein Length | 656 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641245566 |
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| Product | integrase family protein |
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| Protein accession | YP_001510958 |
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| Protein GI | 158318450 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAAGGTA CCCTGTTCAA AAAATACGGA TGCCGAGACC CCGAAACGGG ACGGCAACTC
GGCCGCTCCT GCCCCCGGCT ACGTCGCGCT AACGGCGGAT GGCGTTCGGA CCACGGCACC
TGGTCCTACC GCGTCGACCT ACCGCGCTAT CCCGACAGCA AACGCCGCCT CGTCAGCCGC
GGCGGTTTCC CCACACAGGG AGAAGCCCGC GAAGAACTCG AACGCATCGA AGCACTTCTC
GCCGTCGCCG ACAAGGGCGA CAAGGGCGAC GAGGGCGGGC TACAGAAAGT CGCGGACCTC
ATCGGCAACG CCATCACCAC CGGAACACCC CTCCCGAACC CGGTCGACGT GAAAAACCGC
TACCGGCGCA GCGCCGACCT CAACCCAGAC ATCACCGTCC AAGACTGGAT GACCCGCTGG
CTCGCCAGCC GCAAAACCAT CCGCCCCACC ACCCGGCAAG GCTACGAAGC CTACATCAAG
GTCCACATCG TCCCCGCGAT CGGAACCATC CGCCTCGACA AACTCACCGT CACCCACCTC
GATGACATGT TCACCGCCAT CGACAACACC AACAACGACA TCCGAAAAGC CCGCGAGTCC
GACGACCCCG ACATCCGGCG CGCCGCCCAA CGCAAACGCA TCACCGGCCC CGCCACCCAA
CAGCTCGTCC GCGAGGTCCT CCGCGCCGCA CTCAACGACG CCATCCGACG CGGACTCATC
ACCCACAACC CCGCGAAACA CCTCGAGCTC GCCTCCGGGA AACGCCCCAA AGCCCTCCTC
TGGACCGACG AACGCGTCAG CCGCTGGCGC GAAACCGGGC TCAGACCCTC CCCCGTCATG
GTCTGGACCC CCGCCCAGAC CGGACGCTTC CTCGACCACA CACAGACCGA CCCGCTCTAC
CCCATCTACC ACCTCATCGC CTACCGCGGA CTCCGCTGCG GCGAATCCGT CGGCCTCCAC
TGGGACGACA TCGACTTCAC CCACGCCACC CTCACCATCC GCTGGCAAGT CATCCAGATC
GGCTACGCCA CCCAGCTCGG CCGACCCAAA TCCGACGCAG GCGACCGCGT CATCTCCCTC
GACACCAACA CCCTCACCGT CCTGAGAATC GCCCGCACCC GCCAACACGC CGCCCGCCTC
GCCGCCGGCC GCGACTGGCC CGACACCGGA CTCACCTTCA CCCACCCCGA CGGCCAGCCC
ATCCACCCCG AACACCTCAC CAACCGCTTC CACACCCTCC TCGACGACGC CGCGCTACCC
CCCATCAGCC TCCACGGCCT CCGCCACGGC GCCGCCACCC TCGCCCTCGC CGCCGGCGCC
GACCTCAAAG CCGTCCAAGA ACTCCTCGAC CACTCCACCA TCACCCTCAC CGCCGACACC
TGCACCCACA TCCTCCCCGA CCTCGCCAGC GAGATCGCCG AGAACACCGC CCGGCTCATC
CCCCGCGCCC GCACCCCCAC GACTACCCGA AGACCATCAC CAAGCACTGG CCCCCACCAG
CCCCGCCCGG GCCCGACCCG GGCGGGGCTG GCACCCACAC CACCCACCAA CCCCCAGAAA
CACCCCCGAC GCGCCCACCC GCCGGAACCT CACGCCCCGC CCTCCCCCCG ACCGAGCAGT
TGGGTACGAT GGTCCACAGC AGGGCCGTTA GCTCAATTGG CAGAGCAACC GGCTTTTAAC
CGGCGAGTTT CCCGCCCGGC GGCCGTCGCG AACCTTGATC GACATCGCCT TGACCTGCAT
CGTTCGAAAA AACGACCCTC CAACGCGAGC GCGTCGGGCC GTGTGTGTGC TCAATGTGTG
CTCATTGTGT CGTCGCCCGC CAAACGATCT CCGGTTGCCG CGCTGCGCAG CGGGCGAACC
CGGCCGGCCG AAAGAGGCGG GCTCGCGGCG ATACACCAGA TGAGTTTGAT CGGTATGGCG
GGCCAGCACT GCTGCGTCGG AGATCACAAG CCGAAAAGTC CTGAGATCTG A
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| Protein sequence | MKGTLFKKYG CRDPETGRQL GRSCPRLRRA NGGWRSDHGT WSYRVDLPRY PDSKRRLVSR
GGFPTQGEAR EELERIEALL AVADKGDKGD EGGLQKVADL IGNAITTGTP LPNPVDVKNR
YRRSADLNPD ITVQDWMTRW LASRKTIRPT TRQGYEAYIK VHIVPAIGTI RLDKLTVTHL
DDMFTAIDNT NNDIRKARES DDPDIRRAAQ RKRITGPATQ QLVREVLRAA LNDAIRRGLI
THNPAKHLEL ASGKRPKALL WTDERVSRWR ETGLRPSPVM VWTPAQTGRF LDHTQTDPLY
PIYHLIAYRG LRCGESVGLH WDDIDFTHAT LTIRWQVIQI GYATQLGRPK SDAGDRVISL
DTNTLTVLRI ARTRQHAARL AAGRDWPDTG LTFTHPDGQP IHPEHLTNRF HTLLDDAALP
PISLHGLRHG AATLALAAGA DLKAVQELLD HSTITLTADT CTHILPDLAS EIAENTARLI
PRARTPTTTR RPSPSTGPHQ PRPGPTRAGL APTPPTNPQK HPRRAHPPEP HAPPSPRPSS
WVRWSTAGPL AQLAEQPAFN RRVSRPAAVA NLDRHRLDLH RSKKRPSNAS ASGRVCAQCV
LIVSSPAKRS PVAALRSGRT RPAERGGLAA IHQMSLIGMA GQHCCVGDHK PKSPEI
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