Gene Franean1_6666 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6666 
Symbol 
ID5674981 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp8096926 
End bp8097810 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content71% 
IMG OID641245517 
Productalpha/beta hydrolase fold 
Protein accessionYP_001510909 
Protein GI158318401 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.203299 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.734858 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATGACG AAGCACCGGC CTGGTACGAG GCCGCCATCG ATACTCGTCC CGAGCGGCTG 
GAGACCGAGG CCGACGGGAC GATCATCAGC TACCGGTGCT GGGGGCGGGT CGACGGTCCC
GCAATCGTGC TGGTGCACGG CGGCGCGGCC CACGCGGGCT GGTGGGACCA CATCGCGCCG
CTGATCCCAG CCGAGTACCG GGTGGTGGCT CTGGACCTGT CGGGCCACGG TGACAGCGGG
CGCCGCGAGG AGTACTCGCT GAGCACGTGG GCATCCGAGG TCGTGGCGGT GATCGACCAC
GCCGGGATCA CGTCCCCGCC GATCATCATC GGGCACAGCA TGGGCGGCTG GGTGACCATC
ACGACGGCCG CCGAGTACCC GGACCGCGTC GCCGGCATCG TCGTCGTCGA CTCGCCGGTG
AAGGAGTCGA CCCCGGAGGA GCGCGCCGCC CGCGAGCGGA CGGCCTTCGG CCCCCTGCGG
GTGTACGCGA CGGCGGCCGA CGCGCTGGCA CGGTTCCGCA CCGTCCCCGA GCAGCCGAAC
AGCCTTCCCT ACATCATCGA CCACATCGCC CGGAACTCCA TCGGCGCGAT GCTCGGCGGC
TGGACGTGGA AGTTCGACCC GAACGTGTTC GGCAACCGGA CGCCGTCCCC CGAGGTCCTG
CGCAAGGTCC ACTGCCGGGT CGCGCTGTTC CGCGCCGAGA ACGGGCTGGT CACCCCGGAC
ATCGGCGAGC TGATGTACAA CCTGCTCGGC CGGGTCGCGC CGGTCATCGA GATCCCGCTC
GCGGGGCACC ACGTGATGCT CGACCAGCCG CTGATGCTGG TCACCGGGAT CCGCACCATC
CTGGCCGACT GGGAGCACTC GTCCCCGCAG GAGCGTGCCG ACTAG
 
Protein sequence
MYDEAPAWYE AAIDTRPERL ETEADGTIIS YRCWGRVDGP AIVLVHGGAA HAGWWDHIAP 
LIPAEYRVVA LDLSGHGDSG RREEYSLSTW ASEVVAVIDH AGITSPPIII GHSMGGWVTI
TTAAEYPDRV AGIVVVDSPV KESTPEERAA RERTAFGPLR VYATAADALA RFRTVPEQPN
SLPYIIDHIA RNSIGAMLGG WTWKFDPNVF GNRTPSPEVL RKVHCRVALF RAENGLVTPD
IGELMYNLLG RVAPVIEIPL AGHHVMLDQP LMLVTGIRTI LADWEHSSPQ ERAD