Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_6666 |
Symbol | |
ID | 5674981 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 8096926 |
End bp | 8097810 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641245517 |
Product | alpha/beta hydrolase fold |
Protein accession | YP_001510909 |
Protein GI | 158318401 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.203299 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.734858 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATGACG AAGCACCGGC CTGGTACGAG GCCGCCATCG ATACTCGTCC CGAGCGGCTG GAGACCGAGG CCGACGGGAC GATCATCAGC TACCGGTGCT GGGGGCGGGT CGACGGTCCC GCAATCGTGC TGGTGCACGG CGGCGCGGCC CACGCGGGCT GGTGGGACCA CATCGCGCCG CTGATCCCAG CCGAGTACCG GGTGGTGGCT CTGGACCTGT CGGGCCACGG TGACAGCGGG CGCCGCGAGG AGTACTCGCT GAGCACGTGG GCATCCGAGG TCGTGGCGGT GATCGACCAC GCCGGGATCA CGTCCCCGCC GATCATCATC GGGCACAGCA TGGGCGGCTG GGTGACCATC ACGACGGCCG CCGAGTACCC GGACCGCGTC GCCGGCATCG TCGTCGTCGA CTCGCCGGTG AAGGAGTCGA CCCCGGAGGA GCGCGCCGCC CGCGAGCGGA CGGCCTTCGG CCCCCTGCGG GTGTACGCGA CGGCGGCCGA CGCGCTGGCA CGGTTCCGCA CCGTCCCCGA GCAGCCGAAC AGCCTTCCCT ACATCATCGA CCACATCGCC CGGAACTCCA TCGGCGCGAT GCTCGGCGGC TGGACGTGGA AGTTCGACCC GAACGTGTTC GGCAACCGGA CGCCGTCCCC CGAGGTCCTG CGCAAGGTCC ACTGCCGGGT CGCGCTGTTC CGCGCCGAGA ACGGGCTGGT CACCCCGGAC ATCGGCGAGC TGATGTACAA CCTGCTCGGC CGGGTCGCGC CGGTCATCGA GATCCCGCTC GCGGGGCACC ACGTGATGCT CGACCAGCCG CTGATGCTGG TCACCGGGAT CCGCACCATC CTGGCCGACT GGGAGCACTC GTCCCCGCAG GAGCGTGCCG ACTAG
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Protein sequence | MYDEAPAWYE AAIDTRPERL ETEADGTIIS YRCWGRVDGP AIVLVHGGAA HAGWWDHIAP LIPAEYRVVA LDLSGHGDSG RREEYSLSTW ASEVVAVIDH AGITSPPIII GHSMGGWVTI TTAAEYPDRV AGIVVVDSPV KESTPEERAA RERTAFGPLR VYATAADALA RFRTVPEQPN SLPYIIDHIA RNSIGAMLGG WTWKFDPNVF GNRTPSPEVL RKVHCRVALF RAENGLVTPD IGELMYNLLG RVAPVIEIPL AGHHVMLDQP LMLVTGIRTI LADWEHSSPQ ERAD
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