Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_6618 |
Symbol | |
ID | 5674933 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 8052581 |
End bp | 8053429 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641245469 |
Product | NmrA family protein |
Protein accession | YP_001510861 |
Protein GI | 158318353 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCATTC TTGTCACCGG CGCCAGCGGG AACATCGGGT CGCGTCTGGT CGCCACGCTG GCCGGGTCGG GCTACCCGGT CCGCGGTTCG TCCCGCGACG CGACGACCCT ACGGCTGCCT GCCGGCGTCG AGCTGGCCGA GCTCGATCTC GCCGACCCGG GTCCGTCCGC GGCGAAGGTG CTGCGAGGGG TCGAGGCCGT GTTCCTGTAC CCGGTGATCG GTACTGTCGA CGCCTTCGTA GCGGCGGCCG TGGACGCCGG CGTGCGTTAC GTGGTGCTGC TGTCCTCGCC GGCGGCCTAC GAGGTCGGGG AGTTCAACCG GCCCATCGGG CAGATCCACC GGGCGGTCGA GCGGGCTGTG GTCGACTCGG GTCTCGAACA CACGGTGTTG TATCCGAGCT GGCTCGCGAC CAACACCCGG CGCGACTGGG CAGATCAGAT CCGGACCAGC GGGCGGGTCG CGATGGCGTT CGCGGACGCC CCCGTCACGC CGATCCACCC CGACGACATC GCCGAGGTCG CCGCCCACCT GCTCACCAGC GAGACCTTCC GCTCCCGGAT GCAGATCCTC ACCGGGCCGC GGTCGATGCG CATACGGGAC GCGGTCGCGA TCATCGGCGA CGTGCTCGGT GCCGACGTGC CCGTCGACGA CGTGACCCGG GGGCAGGCAC TGGACCTCGA CCAGGGCCGG ATTCCCCGTT CAATTCTGGA AACCCTGCTC GACGTAGCCG CGGCGACCAT CGGGCAGACA GCCCCCGTCA CCAACACGGT CGAGCGGATC ACCGGTCACC CAGCCCGGTC ACTGCGCTCC TGGCTCGAAG CCCACCGGAG CGACTTCCAA CGCGGCTGA
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Protein sequence | MTILVTGASG NIGSRLVATL AGSGYPVRGS SRDATTLRLP AGVELAELDL ADPGPSAAKV LRGVEAVFLY PVIGTVDAFV AAAVDAGVRY VVLLSSPAAY EVGEFNRPIG QIHRAVERAV VDSGLEHTVL YPSWLATNTR RDWADQIRTS GRVAMAFADA PVTPIHPDDI AEVAAHLLTS ETFRSRMQIL TGPRSMRIRD AVAIIGDVLG ADVPVDDVTR GQALDLDQGR IPRSILETLL DVAAATIGQT APVTNTVERI TGHPARSLRS WLEAHRSDFQ RG
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