Gene Franean1_6593 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6593 
Symbol 
ID5674908 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp8023418 
End bp8024704 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content73% 
IMG OID641245444 
Productfibronectin type III domain-containing protein 
Protein accessionYP_001510836 
Protein GI158318328 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCCGA ATCCCCCGCC GCGAAACGAC AACCTGCGGT TTCGGTTGGC CATCCTCACC 
GGTGACCGGA TACGGCGAGC CGGTGCCCTT CTCCTCGGTG ACGCGGGCCG CGGGTTCCGC
CGCTGGTGCG CTCTGCCGGT GGCGGTGCTG GCCGTCGCGG CGACGGGCGC GCTGTTCGCC
GTCGACGCCG GGAACACCAA CGCGGCGCAG GCTCACCCGG CGGGCGGCCC ACCCGGCGCG
GCGACCGCGG CCGCGGACCT CTCGGACAGC CCCGCCACGC CGGAGCGCGC TCCTACCGGG
AGAGGTGATG CGTCCGCGCC GGGTTCTCCC GGGACGTCGC GGCCCGGCTC GGCGTCGCCA
TCTCCCCCAC TCACCTCGAC TCAGCCGCCG GCGCAGCCTC CGCCCTCGTC GGCGTCGCGC
CCCGGCCCGG CCCGCCCCGA GGCCGGTTCC GCCGAACGGG TGATTCCGCC GCCGGCCGCC
GGGCTCACCG CTGAGCCCGG TGACGGCCGA GCCCGGATCT GCTGGAATCC CGCGCCGAAC
GCCACCGGCT ACGTCATGTA CCACCGGGAC GTCACCACCG GCGAAGGCTG GTACCGGGTC
CCCTACCCCG TCACCGACAC CTGCAGCACC GTCACCCAGC TCACCAACAG CCACACCTAC
GAGTTCAAGG TCCGATCGAG CAACGCCAAC GGCGAGGCCG ACTACTCAGG GACGGTGCAG
GCACGGCCGG CCGGCACGAT CCCGCCACCG GCCACCGGGC TCACCGCGGC CCCCGGGAAC
GGCTCCGCCC GGATCTGCTG GAATCCCGCG CCGAACGCCA CCGGCTACGT CATGTACCAC
CGGGACGTCA CCACCGGCGA AGGCTGGTAC CGGGTCCCCT ACCCCGTCAC CGACACCTGC
AGCACCGTCA CCCAGCTCAC CAACAGCCAC ACCTACGAGT TCAAGGTCCG ATCGAGCAAC
GCCAACGGCG AGGCCGACTA CTCAGGGACG GTGCAGGCAC GGCCGGCCGG CACGATCCCG
CCACCGGCCA CCGGGCTCAC CGCGGCCCCC GGGAACGGCT CCGCCCGGAT CTGCTGGAAT
CCCGCGCCGA ACGCCACCGG CTACGTCATG TACCACCGGG ACGTCACCAC CGGCGAAGGC
TGGTACCGGG TCCCCTACCC CGTCACCGAC ACCTGCAGCA CCGTCACCCA GCTCACCAAC
AGCCACACCT ACGAGTTCAA GGTCCGATCG AGCAACGCCA ACGGCGAGGC CGACTACTCG
GGCACCGCCG CCGCCACGCC CGGCTGA
 
Protein sequence
MEPNPPPRND NLRFRLAILT GDRIRRAGAL LLGDAGRGFR RWCALPVAVL AVAATGALFA 
VDAGNTNAAQ AHPAGGPPGA ATAAADLSDS PATPERAPTG RGDASAPGSP GTSRPGSASP
SPPLTSTQPP AQPPPSSASR PGPARPEAGS AERVIPPPAA GLTAEPGDGR ARICWNPAPN
ATGYVMYHRD VTTGEGWYRV PYPVTDTCST VTQLTNSHTY EFKVRSSNAN GEADYSGTVQ
ARPAGTIPPP ATGLTAAPGN GSARICWNPA PNATGYVMYH RDVTTGEGWY RVPYPVTDTC
STVTQLTNSH TYEFKVRSSN ANGEADYSGT VQARPAGTIP PPATGLTAAP GNGSARICWN
PAPNATGYVM YHRDVTTGEG WYRVPYPVTD TCSTVTQLTN SHTYEFKVRS SNANGEADYS
GTAAATPG