Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_6577 |
Symbol | |
ID | 5674892 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 8001932 |
End bp | 8003470 |
Gene Length | 1539 bp |
Protein Length | 512 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 641245428 |
Product | CHAD domain-containing protein |
Protein accession | YP_001510820 |
Protein GI | 158318312 |
COG category | [S] Function unknown |
COG ID | [COG5607] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.483956 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGCTCTT CGCGGGAGAT CGAACGCAAG TACTCCGTCG ACCAGAGCTT CGTACTTCCC CGGCTGACGC AGGTGGACGG GGTCGCTACC GCCCGCACCC GCCGCACCGT CACCCTGGAG GCCGTCTACT ACGACTCCGA CGACCTGCGG CTGGCCCGCA ACCGCATCAC CCTGCGCCGC CGGACGGGCG GGGACGACGC CGGCTGGCAC CTGAAGCTCC CCGTCGGCCC AGGGGTGCGT GACGAGATCC ACCGCCCGCT CGGCTCCCAC GATCCGGTTC CCGACGATCT TGTCGACCTC GCCACCGTGC ACCTGCGCGG GGCGGAGCTG CGCCCGGTCG CCCGCCTGGT GACGCTGCGC ACCGCCCGCC GCCTGCGCGA CAAGGCGGGC TGTGACCTGG CGGAGGTCGT CGACGACCAG GTGACGGCCC AGACGCTCGG CGCGACCACG GTCGTGCAGA AGTGGCGGGA GATCGAGGTC GAGCTGGGCT CCGGTGACCC GGGCGTGCTC GACGCCGTCG AGGCCGTGCT GACCGCCGCC GGCGCCGAGC TGTCGGCCTC GGCGTCGAAG CTGGCCCAGG TGCTCGGCCC GGCGCTGAGC GGCGCGCCCG GCCCGGACGT GCCGCGCGCC GCGGCGAAGC TGCGCCGGCG GACCCCGGCC GGCGAGGTCG TCCGCGCCTA CCTGGTCGCG CAGGTCGAGG CGCTGCTCGC CACCGACCCG CGGGTGCGCC TGGACGCGCC CGACGCGGTG CACCGGATGC GGGTGGCCTG CCGGCGGACC CGCAGCACCC TGCGGACCTT CGCGCCCTTC TTCCCCGCGG AGCTGGTCGC GCACCTCGAC GTCGAGCTGC GCGACCTGGC CGGGGCGCTG TCCGCCGCGC GCGACGCCGA GGTACAGATC GCCTACTTCG CGGGCCGGCT CGATGACCTG CCCGCCGACC TGCTGCGCGG GGACGTCGTG GGCGCGATCT CGGCCCGGCT CGCGGCCGAC CAGACGGCTG CCCGGGCCCA GGCGCTGGAG ATGCTGCGCA GCGAGCGTTA TCTGACCCTC GTGGAGGATC TGCTCGCGCT CGTCAACGGC CCGTTCGTCG GGCGTTCGGG CAAGCCTGCG GAGAAGGTGC TACCCGGTCT CCTGCACGAC GCCGACCGGC GGCTGAGCCG CAAGGTCAGC CGGGCCGCCC CCCTGCCGGT GGGCACCGAA CGTGACGAGC TCCTGCACTC CGCGCGCAAG CAGGCGAAGC GGCTGCGCTA CGCGGCCGAG GTGGTCGGGC CGGTGTACGG CCCGCCCGCG GCCGCGTTCG CCCGGCTCGC CGAGTCGATG CAGGAGCTGC TCGGCACCCA CCAGGACGCG ACGATCGCCC GCGGCCTGCT GCGCGACTGG GGGGTCGAGG CGCAGACAGC CGGCGAGCCG ACCGCTTACA CCCTGGGCGT ACTGCTCGGG TTGGAGGAGT GCCGCGCCCG CACCGCCGAA CGGGACTTCT TCGACCTGTG GCCGGACGCG TCGGCGCGCC GGCACCGGCG CTGGTTCGCC CGCCGCTGA
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Protein sequence | MGSSREIERK YSVDQSFVLP RLTQVDGVAT ARTRRTVTLE AVYYDSDDLR LARNRITLRR RTGGDDAGWH LKLPVGPGVR DEIHRPLGSH DPVPDDLVDL ATVHLRGAEL RPVARLVTLR TARRLRDKAG CDLAEVVDDQ VTAQTLGATT VVQKWREIEV ELGSGDPGVL DAVEAVLTAA GAELSASASK LAQVLGPALS GAPGPDVPRA AAKLRRRTPA GEVVRAYLVA QVEALLATDP RVRLDAPDAV HRMRVACRRT RSTLRTFAPF FPAELVAHLD VELRDLAGAL SAARDAEVQI AYFAGRLDDL PADLLRGDVV GAISARLAAD QTAARAQALE MLRSERYLTL VEDLLALVNG PFVGRSGKPA EKVLPGLLHD ADRRLSRKVS RAAPLPVGTE RDELLHSARK QAKRLRYAAE VVGPVYGPPA AAFARLAESM QELLGTHQDA TIARGLLRDW GVEAQTAGEP TAYTLGVLLG LEECRARTAE RDFFDLWPDA SARRHRRWFA RR
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