Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_6551 |
Symbol | |
ID | 5674866 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 7967596 |
End bp | 7968507 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641245400 |
Product | parallel beta-helix repeat-containing protein |
Protein accession | YP_001510794 |
Protein GI | 158318286 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.247532 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTCGAC TTGGACCGAC CATCCGGCGC CGGTACGTCC TCATCGCGCT CGTGGCGGCG GTGGTCGCGG CCGGTGGAAT CCTGATCGTC GTCACCGTTG CGAGCGATGG TTCGGACCCG ACAGCAGGCG GGCCCTCGCC AGCCGGTACC GGGACCGCCG TTGCGCCGCC GGTCGGTCCG TCCACGGCCC ACGGGTGCGG GAGCAGGCCG GACGACTCGA ACACCGGCCC ACCCGCGGGC ACCCACCTCG GGCGAACGGC GGACGTAACC CTCCGGACCG CTGGCCAGCT ACTCGTCAAC AAGGAGTTCT TCGGCCTGGT CGACATCTAC GCCGACAATG TCACCATCAG GAACTCGGTC GTCCACGGCA GTATCCGGAT ACGCGGGAAT AACGCCGTGA TAGACCATGT GGCGGCCGCC GGGATCGCAA TCCGTGGCGG CTCCGGTCAT GTCGTTCAGT ACACTGATGT CTCCGGCGGA GATGACGGAT TTCATATCGA TTCCAAATAT CAGCCGGTTT CACGGGTACT CATACGCAAC AACTACGTAC ACGATCCTTC CCCACCGCCC GATGCTCATG TCGACGGCGT CCAGGTTCGC GGCGTACGGA ACCTGAGCCT GCTGTGTAAC AACTTCGACC TGACGCCGTA CCAGCGGACC CAGAATGGCG TCATATATCT TGAGTGGGCG AGCGGTGGAA ACTATGACGT GATCGTCGAC CGTAACTGGC TGAACGGCGG CGGCAGTACG CTGTTTGTCG CCGCGACGAA TCTCCGGGTG ACGCGGAACC GCTTCGGCCG TGATTTCCGC TGGAGCGTCT GCCGGCTCGG CGACAACGAG AGATCATTTT TCAGTGCTGG AAACGTCTGG GATGACACCG GCACACCGGT AAAGCTGTGC GACCAGGAAT AG
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Protein sequence | MARLGPTIRR RYVLIALVAA VVAAGGILIV VTVASDGSDP TAGGPSPAGT GTAVAPPVGP STAHGCGSRP DDSNTGPPAG THLGRTADVT LRTAGQLLVN KEFFGLVDIY ADNVTIRNSV VHGSIRIRGN NAVIDHVAAA GIAIRGGSGH VVQYTDVSGG DDGFHIDSKY QPVSRVLIRN NYVHDPSPPP DAHVDGVQVR GVRNLSLLCN NFDLTPYQRT QNGVIYLEWA SGGNYDVIVD RNWLNGGGST LFVAATNLRV TRNRFGRDFR WSVCRLGDNE RSFFSAGNVW DDTGTPVKLC DQE
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