Gene Franean1_6541 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6541 
Symbol 
ID5674856 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7955505 
End bp7956245 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content63% 
IMG OID641245390 
Producthypothetical protein 
Protein accessionYP_001510784 
Protein GI158318276 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.193415 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAGCCTC CGACCCGTCG GGCGGCTTCG AGTGGCCACA AAACCCTAAT CCCCCACACA 
GCACCGCAGA AAGCAAGGTT TACCTACCTA CCATCTTTCC TTTCTGCGCT CGTGGGGCAC
TTAAAGGACG AGCTGAGCGA GACAGCGTCG ACTGCAATGA GATCGAATAT CGGGACGTCG
GCGTCCCCGC AGCTCGACAA CATCTTCTCC GATGTTCCCC ATGACGTCGT GGGGCAGATT
TCCCCGGACC AGACCCTGGA GCTTATCCGG CTGACCGCGA AAGTCCTCCT GAACGGTATC
GACGAGGTGA TGGACGATGC CTCGACATCG TCTTTGCGCG CAGACCTGGA ACGCTACAGC
CGAAAGGTCG CCTTCTCTGC TGCCACCGTG TGTGCGAAAT TGGCAGAGAA CCGGAGCCGA
GCCGCCGCGC AACGGCAGAC GTTACTCGTG AAAATTCTGG TGAACGGTGA CGAGGAACAG
ACCGCGGAGC GGGATTCCGG CCTGTTTCCG CTCGGCCAGC CGGTGCGGGT CATCGGCATC
GTCCCGCGGC TCGACGAGGC CGAGCTCCTG GTTCACGAGG TCGCCCGGGC CCTGGATCGG
CACCGGGTCA CGGTGTGCGC GGCGGTGCAC GGTCGGGTCG TGTTGGCAGT GCTGCCAGCT
GCCGCTGGGG GCGCCCTAGA CCACAGGGTA CAGGCTCTCG CCTCCGGTCA AATCCTCGTG
TCGCTCGAGA TCTGCTGGTA A
 
Protein sequence
MKPPTRRAAS SGHKTLIPHT APQKARFTYL PSFLSALVGH LKDELSETAS TAMRSNIGTS 
ASPQLDNIFS DVPHDVVGQI SPDQTLELIR LTAKVLLNGI DEVMDDASTS SLRADLERYS
RKVAFSAATV CAKLAENRSR AAAQRQTLLV KILVNGDEEQ TAERDSGLFP LGQPVRVIGI
VPRLDEAELL VHEVARALDR HRVTVCAAVH GRVVLAVLPA AAGGALDHRV QALASGQILV
SLEICW