Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_6474 |
Symbol | |
ID | 5674789 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 7870130 |
End bp | 7871302 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641245322 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_001510717 |
Protein GI | 158318209 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0864936 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAGGC GACCGGCCCT GGGCGCGATC GTCGCCGCCG CCATGACGGT GATGATCGTC GCGGCCTGCG GCGGTGATGG TGTCTCCTCG TCCGGCGACC GCCGCCGGAC GGTCACCATC GGGTTCCAGG GCGTGCTGTC GGGCGACGAC GAGCAGCTGG GTGTCAACGC CCTCTACGGG GTGCGCACGG CGATCGAGGA GATCAACGCG GACGCCAGCC TGCCGTTCCG GGTCGAGCTC GTCTCCTCCG ACGACGGCGG GTCACCCGAG CGGGCGCCGG CCGCCGCGCG CAGGCTCATC GACGACTCCG ATGCGGTGGC CGTCATCGGC CCGATGCTCT CGGACGCGAC AGAGGCCAGC GAGCCGTTCT ACAGCGAGGC CGGCCTGCTC TCGGTCAGCC CGTCCGCCAC CGCCCCGGCG CTCACCGACC TCGGCTTCAC CACCTTCTAC CGGGTCGTCG CCCCCGACTC CGTGCAGGGC CGGGCCGCGG CCGACTACAT CTCCACCGTC CTCGACGCGG GGAAGGTGTA CTCGGTCGAC GACCGCAGCG AGTACGGCAT CGGCCTGTCC ACCGCGCTGG AGGCGGAGCT GTTCTCCGAC GGCGTCGACG TCGTCCACGG CGGCGTCGAC CCGGCCCGGG ACTACACCCG CGAGGCAGCG GAGATCATCG CTGAGGCGCC GGACGTACTC TTCTACTCCG GTCAGTACGC CGACTTCGCG CTGCTCAACA AGGCGCTCGA GGACGGTGGC TTCACGGGCA CCGTCATGGG CGGGGACGCG ACCCGTGACC CGGACTTCGT CACGCGGACG GGCGCGGCTG CCGCCGAGGG CGCCTACTTC TCGTGCGCCT GCAGCGACGT CGACACCGAC CCGGCGGCGA AGGAGTTCGT GGCCTCGTAC AAGGACGTCA ACGGCGGGGC GTTGCCCGGG ACCTACTCGG GGGAGGCCTA CGACGCCACC TGGGCCGTCG TCGACGTCCT GAAGCGGCTC GGGAACAACA TCAGCCGGGA GTCCGTCGCG CGGGCCTTCC GCACCGTCAG CTGGGACGGC CTCACCAGGA AGATCGAGTT CGAGGAGAAC GGCGAGCTCA AGCGCTCGAC CGTCTACCTG TACAAGGTGC AGGACGGTGA GATCACGGAT CTTGGACGGA TCTCGGACCT GATCGGCTCC TGA
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Protein sequence | MIRRPALGAI VAAAMTVMIV AACGGDGVSS SGDRRRTVTI GFQGVLSGDD EQLGVNALYG VRTAIEEINA DASLPFRVEL VSSDDGGSPE RAPAAARRLI DDSDAVAVIG PMLSDATEAS EPFYSEAGLL SVSPSATAPA LTDLGFTTFY RVVAPDSVQG RAAADYISTV LDAGKVYSVD DRSEYGIGLS TALEAELFSD GVDVVHGGVD PARDYTREAA EIIAEAPDVL FYSGQYADFA LLNKALEDGG FTGTVMGGDA TRDPDFVTRT GAAAAEGAYF SCACSDVDTD PAAKEFVASY KDVNGGALPG TYSGEAYDAT WAVVDVLKRL GNNISRESVA RAFRTVSWDG LTRKIEFEEN GELKRSTVYL YKVQDGEITD LGRISDLIGS
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