| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6333 |
|---|
| Symbol | |
|---|
| ID | 5675785 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 7692045 |
|---|
| End bp | 7693166 |
|---|
| Gene Length | 1122 bp |
|---|
| Protein Length | 373 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641245185 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001510580 |
|---|
| Protein GI | 158318072 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGAGCGG GCAGGATCAG CGCCGCGGCC TCGGTTCCCG GCACGACGGG GTCCGCCGGG
CTGCGCGGAC GATCGCAGTC CTCTCCGACG ACCACACCCG CTCGGTCTAC GGCCAGGCCG
AATGGCAGGC CGCCTGGACT GCGGATCCCT CCGGGGCGGC ACACGCTCCT CGTGATGCGG
GTAGCTGACT GCGACCGGCC CGGCCTGCTC GCCCAACTGG TATCCACCGA CCTGTTCGCA
CACCCGGAAC GGCAGGCACG GGTGGAACTG CTCCGCGCGG CGACGCTCGC TCGCTCCGGT
GGCCGGGCGA AACCGCAGCA CGCTCCACCG TTCCCACCTG ATCGGCGGGC GATGCCCGTG
CGGCCGTCGT TCCCTGGCGG CCGGCCGGAC GTGTGGAACG TCCCGCCACG GCCGGCTCAC
TTCGTCGGCC GTACCGATCT TCTCGATCAG GTTCACCAGC AGCTCGGCGA CGCGGGCGCG
GTCGCGGTCT GCGCCCTGCA CGGCCTCGGC GGGATCGGGA AAACCGCCCT CGCGATCGAG
TACGCCCACC GCCACCCGCA CAGCTACGAC CTGATCTGGT GGATAGCTGC CGAAGACCCA
CAGCTGATCC CGGGGCATGT GTCCACCCTC GGCCGGGAAC TCGGCCTGCC CGACGGCGCG
GACTGGCCCG CCGTCCTCAA CGTACTGCGA CGCGAACGGC TGCGTTGGCT GCTCATCCTC
GACAACATCG AAGACCGGAA CGTCATCAGC CCGTTCCGGC CGACGGATCA CCTCGGCCGG
CTACTCGTCA CCTCACGACG CACCGGCCTC GACGCTTTCG GTCCACAGCT CGCCGTACCC
GAACTTCCCC GACGAGACGC GGTCGACCTG CTCACCCGGC GGGTACCCGC CATCGACACC
GGGACGGCCG GGCAGATCGC GGAACTTCTC GGAGACCTGC CCCTAGCCGT GGAACAAGCC
GCCGGCTACC TCACCCAAAC CGGCATGCCC TCCGACGACT ACGTCGAGCT ACTCCGCGGG
CGGCTCGGGG AGATGCTGCA CCGCGGGTGG GTCGCCGACC GGCCCGACAT CACCACCGCC
AACCTGTGGA ACCTGTCCCT GACCCAATGC CGTGAAGCTT AA
|
|---|
| Protein sequence | MRAGRISAAA SVPGTTGSAG LRGRSQSSPT TTPARSTARP NGRPPGLRIP PGRHTLLVMR
VADCDRPGLL AQLVSTDLFA HPERQARVEL LRAATLARSG GRAKPQHAPP FPPDRRAMPV
RPSFPGGRPD VWNVPPRPAH FVGRTDLLDQ VHQQLGDAGA VAVCALHGLG GIGKTALAIE
YAHRHPHSYD LIWWIAAEDP QLIPGHVSTL GRELGLPDGA DWPAVLNVLR RERLRWLLIL
DNIEDRNVIS PFRPTDHLGR LLVTSRRTGL DAFGPQLAVP ELPRRDAVDL LTRRVPAIDT
GTAGQIAELL GDLPLAVEQA AGYLTQTGMP SDDYVELLRG RLGEMLHRGW VADRPDITTA
NLWNLSLTQC REA
|
|---|
| |