Gene Franean1_6009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6009 
Symbol 
ID5674330 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7328681 
End bp7329154 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content76% 
IMG OID641244857 
Producthypothetical protein 
Protein accessionYP_001510259 
Protein GI158317751 
COG category[R] General function prediction only 
COG ID[COG0802] Predicted ATPase or kinase 
TIGRFAM ID[TIGR00150] ATPase, YjeE family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.136114 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGCGC TCGGCGCGCG CCTCGCGCCG CTGCTGCGCG CCGGTGACCT GATCATCCTG 
GACGGCCCGC TGGGCGCCGG CAAGACCGTT TTCGTCCAGG GGCTCGCGGC CGGCCTCGGG
GTGTGCTCCC CGGTGACGTC GCCGACGTTC GTCCTCGCCC GGGTGCACAC CGATGGCCGC
CTGCCGCTGG TCCACGTGGA CGCCTACCGG CTCGGTGGCG CCGCCGAGGT CGACGATCTC
GATCTGGACG CCGATCTCGG GCGGTCGGTG TGCGCGGTCG AGTGGGGTTC CGGGCTGGTG
GAGCAGATGG CCGCGGCCCA TCTGCGGGTG GAGATCAGCC GTCCGTCCGG CGACGAGACC
GGCGATGTGC GGCGGGTGCG GCTGCGGCCC GCGGGGGCCG ACTGGGCCGC CCGGCTGACC
GCGCTGGCCG CTCCGGACCT CACACCGCAC CCGCAGGGGC CCGCGGCGCG TTAG
 
Protein sequence
MRALGARLAP LLRAGDLIIL DGPLGAGKTV FVQGLAAGLG VCSPVTSPTF VLARVHTDGR 
LPLVHVDAYR LGGAAEVDDL DLDADLGRSV CAVEWGSGLV EQMAAAHLRV EISRPSGDET
GDVRRVRLRP AGADWAARLT ALAAPDLTPH PQGPAAR