Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_5891 |
Symbol | |
ID | 5674213 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 7153452 |
End bp | 7154708 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641244740 |
Product | ABC transporter related |
Protein accession | YP_001510142 |
Protein GI | 158317634 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1134] ABC-type polysaccharide/polyol phosphate transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.559875 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCGTCGC AACCGCTCGC CCCGCCCCCG ATGCAGCCCG CGCAACCGGC CGCCTCCGCG CCGTCGGCGC CGCCGGCACC GGGCGCCCCG GTGGTCATCC GCGCCTCCGG CGTCGGCAAG AAGTTCGTCG CCTATCACAA GCGCGCCACC AGCCTGAAGG AACGCTTCGT CCGGCGGGAC ACGACGAGCG GCGAGGACTT CTGGGCGCTG CGCGACATCG ACGTCGAGAT CGGCCGCGGG CAGACGGTGG GGCTCGCCGG GGCGAACGGC TCGGGCAAGT CGACGCTGCT CAAGGTACTC GCCGGAATCC TGCGCCCGAC CCACGGCGAC GTGTCCGTCA GTGGTCGGAT CGCGTCCCTG CTCGAGCTGG GCGCGGGGTT CAACGGCGAG CTCTCCGGCC GGGACAACGT CTACCTCAAC GCGTCCCTGC TCGGCCTGTC CAAGCGCGAG ATCGACCGGC TCTTCGACTC GATCGTCGAC TTCTCCGAGC TGCGCCACAA GATCGACGAC GAGGTCAAGC ACTACTCGTC CGGCCAGTAC GTGCGCCTCG GCTTCGCCGT GGCCGTGCAC GTCGACCCGG ACGTCCTGCT CGTCGACGAG GTGCTCGCCG TCGGCGACGA GGCGTTCCAG CGCAAGTGCC TGGCCAAGAT CGCCCAGTTC CGCGACGAGG GCCGGACGAT CCTGTTCGTC ACCCACTCCC TCGACCTGAT CGAGAACATG TGCGACCGGA TCCTGGTGCT GGAGTCCGGC GGCCTGATCT TCGACGGGCA GCCGGTCGTC GGGACGAAGC TGCTGCGCCA GCGGCTGGGC AGCCTGCCCG CGGACAGTCC GATCCCCTTC GACCTGGCGC CGGTGAAGCC GACGGCGGTG GCGTTCAGCC GCAACCCGGG CGGGCCGACC GAGGTGCAGT ACGACCCGGG TGAGCAGCTC ACGGTCAGCG TCGAGCTCGA CCTCACCGAC AGCGCGCCGC AGTACGTCTA CCTGCACGTG GAGATCATGG GGCAGGGAGA GGTACCGATC TGGATGATGG AGACCCCGCC GGGCGGGGTC AGCCCCGGCC CGGGGACCGC CGTGGTGGAC TTCGTCGTCC CCCGGCTGCC CGAGCTGCTG GGGGCGTTCG CGATCAACGT CCGGGTGTCG GACGCGGCCA CCGGCCAGCC GGTGACGGTA CGGCGCTTCG AGGAGCTGTT CGGGGTCAGC GGCCCGCAGG TCGCCGGGCT GCTCAAGGTC GACTACGAGG CGAGGCTGCG CCGATGA
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Protein sequence | MPSQPLAPPP MQPAQPAASA PSAPPAPGAP VVIRASGVGK KFVAYHKRAT SLKERFVRRD TTSGEDFWAL RDIDVEIGRG QTVGLAGANG SGKSTLLKVL AGILRPTHGD VSVSGRIASL LELGAGFNGE LSGRDNVYLN ASLLGLSKRE IDRLFDSIVD FSELRHKIDD EVKHYSSGQY VRLGFAVAVH VDPDVLLVDE VLAVGDEAFQ RKCLAKIAQF RDEGRTILFV THSLDLIENM CDRILVLESG GLIFDGQPVV GTKLLRQRLG SLPADSPIPF DLAPVKPTAV AFSRNPGGPT EVQYDPGEQL TVSVELDLTD SAPQYVYLHV EIMGQGEVPI WMMETPPGGV SPGPGTAVVD FVVPRLPELL GAFAINVRVS DAATGQPVTV RRFEELFGVS GPQVAGLLKV DYEARLRR
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