| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5865 |
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| Symbol | fbiC |
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| ID | 5674188 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 7117081 |
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| End bp | 7119915 |
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| Gene Length | 2835 bp |
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| Protein Length | 944 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641244715 |
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| Product | FO synthase |
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| Protein accession | YP_001510117 |
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| Protein GI | 158317609 |
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| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes |
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| TIGRFAM ID | [TIGR00423] radical SAM domain protein, CofH subfamily
[TIGR03550] 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofG subunit
[TIGR03551] 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofH subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.342546 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.564684 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAGTA CGGCGGCGGT ACCGGACGGA TCACGACCCG GGCAGGCGGT GGCCCCGGAA
CAGGGGAGCC GGCACCGGCC GGAACCGCCG CCGTCCTCCG CCGCCATGCG CCGCGCCCTG
CGCCGCGCGC GCGACGGCGT CACCCTGGAC GTCACCGAGG CCGCGATCCT GCTCGCGGCG
CGCGGCGAGG ATCTCGCCGA CCTGTGCGCC TCCGCGGCGC GCGTGCGTGA CGCCGGGCTC
GCCTCCCTGG GACGGCCCGG CGTCGTCACC TACTCGCCGA AGGTCTTCAT CCCGCTCACC
CGGCTGTGTC GGGACCGCTG CCACTACTGC ACATTCGCGA CCGTCCCGCA CCGGCTGCCC
GCGCCGTACC TGACGGTGGA CGAGGTGCTC GACATCGCCC GCGCGGGGGC GGCGGCGGGG
TGCGCCGAGG CGCTGTTCAC CCTCGGCGAC CGCCCGGAGG ACCGCTGGCC GGCCGCCCGG
GAGTGGCTCG ACGCCCACGG CTACGACTCG ACGCTGGGCT ACCTGCGCGC CGTCGCGATC
GCGGTGCTGG AGGAGACCGG CCTGCTGCCG CATCTCAATC CCGGCGTGCT GAGCTGGTCG
GAGCTCGCGC GGCTCAAGCC GGTCGCGCCG TCGATGGGCA TGATGCTGGA GACGACCGCG
ACGCGGCTGT GGTCGACGCC CGGCGGCGCC CACTACGGCT CGCCCGACAA GGAGCCCGCC
GTCCGGCTGC GGGTGCTGGC CGACGCCGGG CGGCTCTCCA TTCCCTTCAC GACCGGCCTG
CTGCTCGGCA TCGGCGAGAC GGCCGTCGAG CGCGCCGAGA CGATCTTCGC GCTGCGTGGG
CTGGCCCGCG AGTACGGGTC CGTCCAGGAG GTCATCGTCC AGAACTTCCG GGCCAAGGAT
GACACCGCGA TGCGCGGTGA GCCGGACGTC GGCGCCGAGG AGCTCGCGGC GGCCGTGGCG
GTGACCCGCC TGGTGCTCGG CCCGCGGATG CGGGTGCAGG CGCCGCCGAA CCTCGTCGAC
ACCGCCGAAT GCGCGCTGCT GCTCTCCGCC GGCCTCGACG ACTGGGGCGG TGTCTCGCCG
GTGACCCCGG ACCACGTCAA CCCGGAGCGG CCCTGGCCTG ATCTGGACGT CCTGCGGGAG
GTGACCGCGG CGGCGGGCTT CACGCTGCGG CCGCGGCTGA CCGTCCACCC GACACACCTG
GACGAGCCGT GGATCGACCC GCGGCTGTCC GGGCACGTGG CGGCGCTGGC TGGTCCGGAC
GGGCTGCTCG CCGAGGGCGC CCGGGCGGCG GGGCTGCCGT GGCAGGAGCC CGACGGCGGT
CTGGGGAACA GCGGCCGCAC CGACCTGCAC ACCACGGTGG ACACCGAGGG ACGACACTCG
GCCACCCGTT CCGACTTCGA CTCCGTCTAC GGCGACTGGG CCGGCCTGCG CGAGCAGGTG
CGCGCCGCCG GCACCGGGGT GGACGGGATC TACGGCACGG GCACCCGGGC GGGCGCCGGT
GCCGCGGAAG CCGTGGCATC CGCCGCGGGG GAGGAGACCA CCGAGGACAC GGCTCCGGTC
GGCACGGTGG TCCCGGCCGG CACGGTGGCC GGTGGCGGCG TCCCGTCCGA GGACGGGTTC
GAAGAGACCA CAGCCACCAC AGGAACCACC GACGGCGCGC GCGGCGCGAT CACCCGGACG
GAGCCGGAGG TGCTCGCGGC GCTGCGGCGG GCCAGCACCG ACCCGGCCGG ACTCACCGAC
GCCGAGGCGC TGACCCTGTT CGGAGCGACG GGCGCCGCGC TGGAAGAGCT GTGCGGCCTC
GCCGACGCCC TGCGCGCCCA GACCGTGGGC GACGACGTGA CCTACGTGGT GAACCGCAAC
ATCAACTTCA CCAACGTCTG CTACACCGGC TGCCGCTTCT GTGCCTTCGC CCAGCGCCGC
GCGGACGCCG ACGCCTACAC GCTCTCCCTG GACGAGGTCG GCTCCCGCGC GCGGGACGCG
TGGTCCGTCG GCGCGACGGA GGTCTGCGTC CAGGGCGGCA TCCACCCGGA CCTGCCGGGC
ACCGCCTACT TCGAGCTCGC CCGCGAGATC AAGAAGCAGG CGCCCGGGCT GCACCTGCAC
GCCTTCTCGC CGATGGAGGT GGCCAACGGG GTCGCCCGCA CCGGGCTGTC GACGCTGGAG
TGGCTCACGG CGGCCCGGGA GGCCGGGGTG GACACCATCC CCGGCACCGC CGCGGAGATC
CTCGACGACG AGGTCCGCTG GGTGCTGACC AAGGGCAAGC TGCCCACCGC CGCCTGGGTC
GAGGTGGTCA CCACCGCGCA CCGCGTCGGC CTGCGCTCCT CGGCGACGAT GATGTACGGC
CACGTGGACA CCCCGGCGCA CTGGGTGGCC CACCTGCGCC TGCTGCGCCG CATCCAGGAG
GAGACGGGCG GGTTCACCGA GTTCGTCGCG CTGCCCTTCG TGCACCACAG CTCCCCGATC
TATCTAGCCG GGGTTGCCCG ACCGGGCCCC ACCGTTCAGG AGAACCGGGC GGTGCACGCC
ATGGCCCGGA TCCTGTTGCA CGGAGCGATC GACAACATTC AGTGCTCGTG GGTGAAGCTC
GGTACGGAGG GCTGCGTCCA GGTGCTCGCC GGTGGGGTCA ACGACCTCGG AGGCACGCTG
ATGGAGGAGA CGATCAGCCG GATGGCGGGC TCGCAACACG GCTCACGGCG CTCCATAGCC
GAGCTGGAGG AGGTCGCGCA GGCCGCGGGC CGTCCCGCTC GGCAACGGAC CACTACATAT
GGCGTGGTCT CCGCGGAGCG TCTCGGTACC GCACGTGGTG ACGCTGCGCG CACCATGCTG
ACTGTCGTGA CCTGA
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| Protein sequence | MTSTAAVPDG SRPGQAVAPE QGSRHRPEPP PSSAAMRRAL RRARDGVTLD VTEAAILLAA
RGEDLADLCA SAARVRDAGL ASLGRPGVVT YSPKVFIPLT RLCRDRCHYC TFATVPHRLP
APYLTVDEVL DIARAGAAAG CAEALFTLGD RPEDRWPAAR EWLDAHGYDS TLGYLRAVAI
AVLEETGLLP HLNPGVLSWS ELARLKPVAP SMGMMLETTA TRLWSTPGGA HYGSPDKEPA
VRLRVLADAG RLSIPFTTGL LLGIGETAVE RAETIFALRG LAREYGSVQE VIVQNFRAKD
DTAMRGEPDV GAEELAAAVA VTRLVLGPRM RVQAPPNLVD TAECALLLSA GLDDWGGVSP
VTPDHVNPER PWPDLDVLRE VTAAAGFTLR PRLTVHPTHL DEPWIDPRLS GHVAALAGPD
GLLAEGARAA GLPWQEPDGG LGNSGRTDLH TTVDTEGRHS ATRSDFDSVY GDWAGLREQV
RAAGTGVDGI YGTGTRAGAG AAEAVASAAG EETTEDTAPV GTVVPAGTVA GGGVPSEDGF
EETTATTGTT DGARGAITRT EPEVLAALRR ASTDPAGLTD AEALTLFGAT GAALEELCGL
ADALRAQTVG DDVTYVVNRN INFTNVCYTG CRFCAFAQRR ADADAYTLSL DEVGSRARDA
WSVGATEVCV QGGIHPDLPG TAYFELAREI KKQAPGLHLH AFSPMEVANG VARTGLSTLE
WLTAAREAGV DTIPGTAAEI LDDEVRWVLT KGKLPTAAWV EVVTTAHRVG LRSSATMMYG
HVDTPAHWVA HLRLLRRIQE ETGGFTEFVA LPFVHHSSPI YLAGVARPGP TVQENRAVHA
MARILLHGAI DNIQCSWVKL GTEGCVQVLA GGVNDLGGTL MEETISRMAG SQHGSRRSIA
ELEEVAQAAG RPARQRTTTY GVVSAERLGT ARGDAARTML TVVT
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