Gene Franean1_5639 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5639 
Symbol 
ID5673966 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp6852665 
End bp6853459 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content75% 
IMG OID641244493 
Productalpha/beta hydrolase fold 
Protein accessionYP_001509896 
Protein GI158317388 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.801232 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACACA CCGACTCCGG CGGCGACGGC GAACCGCTCG TCCTGATCCA CGCAGCAGTC 
TTCGCCGACT GGTTCGTCCC GTTCGAGCGC GAGCCGGCCG TCGCCGGCCT GCGCCGGATC
CGCGTCACCC GCACCGGGTA CTCGGACCCC GCACCCACCG AGCCGCTGTC AGTGGCCGAC
CACGCCGCCG AGTGCGCGGA CCTGTTGCGC CGCCTCGGGA TCGAGCGGGC CCGGGTGCTC
GCGCACTCCT CCGGCACCGT GGTCGCGCTA CAGCTGGCCC TCGACCACCC GGAGCTGGTC
GGCGAACTCG TCCTGGTCGA GCCGCCGCTG ATCGACCCGC TCCTGCCGCC GCAGGACCGG
GCGACGGTCG CCGCCGCGAT CGGCCCCGCC CTGGGCGCGG CGATGGGCGC CGCCGCCCAG
GGCGACCTGC GCACCGCCTT CGACACCTTC CTGACGGCGG TGTGCGGACC GCAGCACCGA
TCCGTCATCG AGTCCGCCCT CGGCCGAGCC GGCCTGGAAC GCGCCGAACG CGACTGCGGC
TACTGCTTCA CCGGCGAGGT GCCCGCGCTC ACCGCGTGGC ACTTCGACGA GGAACTGGCA
CGCCGGATCG AGCAGCCGGT CCATCTCGTC GCCGGCGGCG AGAGCCCACC CTTCACCCAC
CGCCTCGTCG ACCACCTCGC CACGATGCTC CCCGACACCC GCACCACCGT CGTCCCCGGC
GAGAACCACC TGCTCCCCCT CTGCGCCCCC ACCGCCCTCG CCACCCTCCT CCCCACCCCG
ACCCCCACCC CCTGA
 
Protein sequence
MRHTDSGGDG EPLVLIHAAV FADWFVPFER EPAVAGLRRI RVTRTGYSDP APTEPLSVAD 
HAAECADLLR RLGIERARVL AHSSGTVVAL QLALDHPELV GELVLVEPPL IDPLLPPQDR
ATVAAAIGPA LGAAMGAAAQ GDLRTAFDTF LTAVCGPQHR SVIESALGRA GLERAERDCG
YCFTGEVPAL TAWHFDEELA RRIEQPVHLV AGGESPPFTH RLVDHLATML PDTRTTVVPG
ENHLLPLCAP TALATLLPTP TPTP