Gene Franean1_5566 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5566 
Symbol 
ID5673895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp6746397 
End bp6747200 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content75% 
IMG OID641244421 
Productmethyltransferase type 12 
Protein accessionYP_001509825 
Protein GI158317317 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.509991 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGACG CCTGGCCCCG TCGGTACGCG GACGAGGTTC TCGGCGGCGC GGCGGACGGC 
GAACGGCGCC GGCTCGCCGC CATGGCCGCG GTGTGCGACC CGGTGACGAC CCACCTCCTC
GACGAGCTCG GCGTCGCCGC CGGGTGGCGA TGCCTCGAGG TGGGCGCCGG CGCGGGGTCG
GTGGCGGCCT GGCTGGCCGA CCGCGTCACC GCCGCCGGCC AGGTCACCGC GACCGACATC
GACCTCAGCC ACCTGGCCGG CCTCAGCGCG CCCGGCCTGT CCGTCCTGCG CCACGACGTG
ACCCGCGACC CGGCGCCGCC CGGCGCGCCG TTCGACCTCG TGCACGCCCG CTTCGTGCTC
GAACACCTTC CCGAGCGCGA ACAGGTCCTC GACCGGCTGG TGTCCTGGCT GCGGCCGGGC
GGCACGATCG TCGTCGAGTC GATCGCGAGC TTCCCGGTGG CCTCCTCCCC CAACCCGACG
TTCCGCCAGG CGATGACCGC CATCGAACAG GTCCTCGCGC GGACGATCGG CACGGACTCG
ACGTGGGCGC GCGGGTTCCC CGGCCCGCTG CGCAGCCGGC ACCTGGTCGA CGTGGGAACC
TCCAGCCACC TGCCGACCAC CGGCGGGGCG AACGCGTCCG CGTGCTGCTG GGCGCTCACC
CTCAGCCGGC TCCGCCCGCA CATCCTCAGT CTCGGGCTGG CCACCGCCGA CACCGTGGAC
CGCGCCCTCG ACCTGCTCGC CGACCCGGCC TTCTTCGACC TTTCCTTCGC GACAGCCATC
GCCTGGGGCC GCGCACCGGA CTAG
 
Protein sequence
MNDAWPRRYA DEVLGGAADG ERRRLAAMAA VCDPVTTHLL DELGVAAGWR CLEVGAGAGS 
VAAWLADRVT AAGQVTATDI DLSHLAGLSA PGLSVLRHDV TRDPAPPGAP FDLVHARFVL
EHLPEREQVL DRLVSWLRPG GTIVVESIAS FPVASSPNPT FRQAMTAIEQ VLARTIGTDS
TWARGFPGPL RSRHLVDVGT SSHLPTTGGA NASACCWALT LSRLRPHILS LGLATADTVD
RALDLLADPA FFDLSFATAI AWGRAPD