Gene Franean1_5548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5548 
Symbol 
ID5673878 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp6719105 
End bp6719386 
Gene Length282 bp 
Protein Length93 aa 
Translation table11 
GC content65% 
IMG OID641244404 
ProductDNA polymerase beta subunit 
Protein accessionYP_001509808 
Protein GI158317300 
COG category[R] General function prediction only 
COG ID[COG1669] Predicted nucleotidyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.861724 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAC TGCGTCGCCA TCGCGCGGAC GTCTACGCGA TCGCGCGACG CTACGGTGTG 
AGCAACATCC GTGTCTTCGG CTCCGTCGCC CGCGCCGAAG CAGACAACGC GAGCGACGTC
GACCTCCTTG TCGATCTCGC TCCAGGACGA GGTCTGTTCG ATCTGGGCGG CTTCATCAGC
GACACCGAGG CGACGCTCAA TGTCCACGTT GACGTCACGA CAGTTGCTGG ACTACGACCC
CGGCTCCGTC CGCAGGTCCT TGCCGAGGCC GTCGCACTGT GA
 
Protein sequence
MSELRRHRAD VYAIARRYGV SNIRVFGSVA RAEADNASDV DLLVDLAPGR GLFDLGGFIS 
DTEATLNVHV DVTTVAGLRP RLRPQVLAEA VAL