| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5480 |
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| Symbol | |
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| ID | 5673811 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 6627643 |
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| End bp | 6629010 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641244335 |
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| Product | protein serine/threonine phosphatase |
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| Protein accession | YP_001509741 |
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| Protein GI | 158317233 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00189535 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCCGGG CCCGTGATCG TCGTGGCGGG CCGGCTGTGA GCGTTGACGC CCTGCTGCGT
CGCCGATGGC GGCAGCGCGG CCGGCCCCGC GACCGCGGCG CGTGGGTGAT GCCGCCCGGC
ACACCGCCCG AGGCCCCCTA CCAGCCCAAA GTCCCTGACG ACGCCGCGGC GCGAACCGAC
ACCGAGCCTC GGGCCGAAGC CGCGCCCCAG GGGGCCGATA GGCGGGGGCA TGGGCTGCGG
GCGCGCCGCC TGATCGCCAG GTGGGCGGTG CGGGGAGCCC CGCTGGCGAT GCTCGGCGTG
ATCGTCGGTG TCCAGTTCAC GAGTGATCAC TGGACGATTC TCGAGCTCAC CGTCCTCAGC
CCGTTGCTCG CCGCCACCCT GGCCGGGCCC GCCCTGACCA CGGTCTACGT GGTCGTGGCG
TTGCTGGCCT GCGTGTTGAT GGGCCTGCAG GACGGGCTGT TCGCCGGCAA CGAGGGCGGG
CTGGCCGCCC AGCTGGTGCG ACTCACCGGG GTGGCTGTCG GGGGAGTCAT GGCCGTCCTG
GTCAGCCGGT ACAACACGCG ACGTGAGACG AAGCTGCAGA ACGTCACCAG GGTCGCCGAG
ATGGCCCAGC GGGCGATCCT GTCCTGTGTG CCGGTGCTCT CGGGGCAGTT ACGGCTGGCC
GTCCGCTATG AGAGTGCCGC CGCCGAGGCG ATGGTGGGCG GTGATCTCTA CGAGGTGGTG
GACAGCCCGT GGGGCACCCG GCTGCTGATC GGTGATGTGC GCGGCAAGGG CCTGGACGCG
GTCGGGATCG CCAGCCGGGT GCTCGGCTGC TTCCGGGTCG TCGCCCGGCT CCGCCCGGAT
CTCGGCGCCG TCCTGATCGA CCTGGACCGG GAGGTCGCCG AGATCAGCGG CCTGGACGAC
TTCGTCACCG CCGTCGTCGT GCAGATCCGC GGCGACCGGA TGGACATGGT CAACGCCGGG
CACCCCGATC CGATCCTGGT ACGCCGGACG TCCGCGCGAC CGCTGACCGC GGTCAGCAGG
CGGCCGCCGC TCGGGCTTCT GGTCGGCGGG GCCGACAGCA CCTCGATCGT GATCGAGCCC
GGGGACCGGG TGCTGCTCTA CACCGACGGC ATCGCCGAGG CCCGCCATCC CGGGTCGGGG
GAGTTCTTCC CGCTGGTACC GGCCGTGGGC GCGGCGCTGG CCCGGCCCGC CACCCTCGAC
AACTGCTTGG GTGATCTTGT CGCCCGGGTC CGGGAGTGGA CGGGCTCGGC GCTCACCGAC
GACGTCGCGC TGCTGGTGGC GGAGGTCCTG GGGCCCGGGT CTCTGGCATC GGGGCGCCGC
CCGGCGGCCG CTGACCTCGC GGATCCCGTC CGGCCTACTT CTTGGTGA
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| Protein sequence | MIRARDRRGG PAVSVDALLR RRWRQRGRPR DRGAWVMPPG TPPEAPYQPK VPDDAAARTD
TEPRAEAAPQ GADRRGHGLR ARRLIARWAV RGAPLAMLGV IVGVQFTSDH WTILELTVLS
PLLAATLAGP ALTTVYVVVA LLACVLMGLQ DGLFAGNEGG LAAQLVRLTG VAVGGVMAVL
VSRYNTRRET KLQNVTRVAE MAQRAILSCV PVLSGQLRLA VRYESAAAEA MVGGDLYEVV
DSPWGTRLLI GDVRGKGLDA VGIASRVLGC FRVVARLRPD LGAVLIDLDR EVAEISGLDD
FVTAVVVQIR GDRMDMVNAG HPDPILVRRT SARPLTAVSR RPPLGLLVGG ADSTSIVIEP
GDRVLLYTDG IAEARHPGSG EFFPLVPAVG AALARPATLD NCLGDLVARV REWTGSALTD
DVALLVAEVL GPGSLASGRR PAAADLADPV RPTSW
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