| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5465 |
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| Symbol | |
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| ID | 5673796 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 6609507 |
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| End bp | 6611834 |
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| Gene Length | 2328 bp |
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| Protein Length | 775 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 641244320 |
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| Product | SARP family transcriptional regulator |
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| Protein accession | YP_001509726 |
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| Protein GI | 158317218 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3629] DNA-binding transcriptional activator of the SARP family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGCGG GCAAGGTGCT GGAACCTCTC GGAGCTGAGC CGGTGGCGGC GCATTCTTTG
TTTGTCGACG CGGTGACCGG CGGCGTCACC GTGTTTGTCG CGCCACCCGG CACGCTGCTC
ACCGACGGGC TCGCGGCCGC GCTGGAGGCG GTCGGCCGGA CACCGGTCTG GCTCCGGCTG
GGCGTCGAGG ACCGCGATCC GGCGACCTTC CTGGCAACGA TGATCACCGC GGTGCGGCGC
AGGGCCCCCG GGTTCGGCGC CACCCTGCTC ACGCGGGTGC GGGCGTGGCC GGGCCCGGTG
CACGGGTGGG ACGACATCTT CCGGCGGCTC GGCGCGGAGC TGGCCGAGCG GCTCCCGCCC
GACTCGGCGC TGGTCCTGGA GCATGCAGAC CGGATCGATC CGCACGGGCC GTCGTTACGC
CTCGCGTGCG GCCATGTTCT GGGCGCTCTG CCCGAGGCGA CGCCCCGCGT CCTGATCGGC
CACGACGCGC TCCCGAGCAC CGAGGCGCTC GGGGACGCCC GCCGGCCGCC GGCCGAGCAC
GCCCGGCTGC ACCCGTCGGA GGTGGAGCTC CCCGGCAGGC TCGGCCTCTG GCGGCGCCAC
GCGGGGGTGC TCCTCTGCCG GTCCGCCGCC CTCCGGCACG CTGTCGACTT CGTGTGCGCC
ACGATGCCGG AAGGTGATCT GGCGCGGGCC CTACGCGGCC GGACACTCGT CGGTGTGCTC
ACCGCGCTGG CCCGAGCAGT CCTCGCGGGA GCCACCGGTG CGGGCCGTCG CATGCTCGCG
CGGCTGCTGC ACGTCGAGTA CATCGTCCCC GAGGCGGACC GGCATCAACT CGCCGAGGTG
GCGGGACCAT GGTTCCAGCC GTTGATCGGC GACTGGTCAC GACTGCGCAC CGTCTGGCGT
GCGCCGCTGC TCGCCGCGCT GGCCGAGGAC GCGTCGCTGG ACCGCGAGAC CCTGCGCGGC
ACCGCGCTCG AGCTTCTGCG GGCAGGTGCT CCGGAACGGG CGATCCCCAT GCTGCTCGAG
TTCGACGATC GCGCGGTGGC GGCGCGGGCG CTGGCCAGGG TCGCCGCCGA CATGATCGCC
GCCGGCCAGT GGGTGACAGT CGGCGGATGG CTGGACCAAC TGCCGCCCGA GGCTGTCGAG
GCGGAACCGG ATCTGCTCGA CGCGGCCGCG CACGTCGCCT CGGCCCGGGG CCAGCAGGAC
CCCGCCCGTC ATCGGTCCCA CGCGGCGGCC GCCGCGGTCT CCGAGACGGA CCGGCTGGCC
CGGCGGCTGG CGGACATCCG GCGGGACCGG CGCCTGCATG CCGAGGCCGA GGCCGCGCTC
GCCCGGTCTG AGGACGAGAC GACGGCGCTC CTGCACGCGC ACATCGCGAG CGTGTCCGAC
GGCCCCGGCC CCAGGGCGCC GAGGGCCGAC GGCGCCACGC CGGGCTCCGT GTCGTTCGGC
CTGGTGCCGG GGCCCAGGCA CCCGGGTCCG GAGGCGATCC GCCGGGTCGA CTCGCCCACG
GGTCCGCCCA CGGGTCCGCC CGCGGGCCGG CTGAACGTGG GCGGACCCGT CCCCCCGGAC
GCGGCGGGGC GGGTGGAGAT GGCCGTGCAC GTGCTGGGGC CACTGTCGGT GATGGTGGAC
GGGCGGCCTG TGCGGGGGTG GGGGGCCCGG CCCCGGTCCC TGCTGGCTTA CCTGGTGATC
CACCGGGCGG ACCTGCCCCC GCGAGAGGTC GTCACCGAGG CGCTGTGGCC CGGCGCGGAC
CTGCCCGCAG CGCGGAACAA CATTCAGGTG GCCGTGTACG GCGCGCGGCG GGCCCTGCGT
GAGGCCGTCG ACCGGCAGGT CATCGTGTTC GAGCGCGGCG TGTACCGGCT GGCCTCCGAC
ATCGCGGTGG CCGTCGACCT CGACGAGTTC GACGGCCATG TCCAGGCCGG GCAGCGGCTC
GCCGGCGCGG GGCACGTCGA GCACGCCATC GCCGAGCTGG AGGCGGCGAC CGCGCTGTAC
CGGGGCGACT TCCTCGCCGA CGCGCGTTCC GAAGACTGGG CCGTGCTGCG CCGCGAACAG
CTCAGGCTGG CCTACCTGGA GGCGCTGGAC CGGCTCAGCT CGCTGTACCT GGAGACCAGG
CAGTACTCGG TCTGCGCGCT GCTGTGCCGG CAGATCCTGG AACGCGACCC GTGCCGGGAG
GACGCCCACC GCCGCCTCAT GCGCTCCTAC GCCCGGCAGG GGCAGCCGCA CCTGGCGCTG
TTGCAGTTCC GGACCTGCGC CGACGTCCTC GCCCGCGAGC TGCGCGTCGC GCCGGGACCG
GCGACAGCGC GCCTGCACGA GCGGATCCGC CGGCACGAGC CCGTCTGA
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| Protein sequence | MLAGKVLEPL GAEPVAAHSL FVDAVTGGVT VFVAPPGTLL TDGLAAALEA VGRTPVWLRL
GVEDRDPATF LATMITAVRR RAPGFGATLL TRVRAWPGPV HGWDDIFRRL GAELAERLPP
DSALVLEHAD RIDPHGPSLR LACGHVLGAL PEATPRVLIG HDALPSTEAL GDARRPPAEH
ARLHPSEVEL PGRLGLWRRH AGVLLCRSAA LRHAVDFVCA TMPEGDLARA LRGRTLVGVL
TALARAVLAG ATGAGRRMLA RLLHVEYIVP EADRHQLAEV AGPWFQPLIG DWSRLRTVWR
APLLAALAED ASLDRETLRG TALELLRAGA PERAIPMLLE FDDRAVAARA LARVAADMIA
AGQWVTVGGW LDQLPPEAVE AEPDLLDAAA HVASARGQQD PARHRSHAAA AAVSETDRLA
RRLADIRRDR RLHAEAEAAL ARSEDETTAL LHAHIASVSD GPGPRAPRAD GATPGSVSFG
LVPGPRHPGP EAIRRVDSPT GPPTGPPAGR LNVGGPVPPD AAGRVEMAVH VLGPLSVMVD
GRPVRGWGAR PRSLLAYLVI HRADLPPREV VTEALWPGAD LPAARNNIQV AVYGARRALR
EAVDRQVIVF ERGVYRLASD IAVAVDLDEF DGHVQAGQRL AGAGHVEHAI AELEAATALY
RGDFLADARS EDWAVLRREQ LRLAYLEALD RLSSLYLETR QYSVCALLCR QILERDPCRE
DAHRRLMRSY ARQGQPHLAL LQFRTCADVL ARELRVAPGP ATARLHERIR RHEPV
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