Gene Franean1_5451 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5451 
Symbol 
ID5673782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp6594535 
End bp6595167 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content71% 
IMG OID641244306 
Productmethyltransferase type 11 
Protein accessionYP_001509712 
Protein GI158317204 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2230] Cyclopropane fatty acid synthase and related methyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.594533 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.278605 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCATCG CGAACGGTCC GGACGGCGTG CCCATTCCGC TGCGGCCGCG ACATCCGGCT 
GACTTCGACG CGTTCTACCA GGGGACACCG CCCTGGGACA TCGGCCGCCC CCAGCCTGCG
TTCGAGGCCC TCGCCGAGGC GGGGCTGATC CGCGGCCGGG TGCTCGACGT GGGCTGCGGC
ACCGGGGAAC ACACTCTGAT GGCCGCCGGT CGCGGCCTGG AGGCCACCGG CGTCGACACC
GCCGCGGCAG CCATCGCCCG TGCCGATGCC AAAGCGGCCG ACCGGGGCAT CTCGGCTCGG
TTCCTGGTCT GGGACGCGCT GGAGCTGGTC GCCCTTGACG AGAGGTTCGA CACGGTGCTC
GACTGCGGCC TGTTCCACGT CTTCACCGAC GGCGACCGCA CCCGTTTCAT CGCGGCCCTC
GGGGCCACGA TCGCCAGCGG CGGCCGCTAT TTCATGCTCT GCTTCAATGA TCAGGTTCCC
GGGGAGACCG GACCACGCCG GGTCAGCCAG CACGAGATCC GAGCCGGTTT CACCGACGGC
TGGCGGGTCG ACTCCGTCGA ACCGGCCGAG ATCGAGATCA CCATCGGGCC GAGCGCGATC
CCGTCCTGGC TGGCCACCAT CACCCGGCTC TGA
 
Protein sequence
MAIANGPDGV PIPLRPRHPA DFDAFYQGTP PWDIGRPQPA FEALAEAGLI RGRVLDVGCG 
TGEHTLMAAG RGLEATGVDT AAAAIARADA KAADRGISAR FLVWDALELV ALDERFDTVL
DCGLFHVFTD GDRTRFIAAL GATIASGGRY FMLCFNDQVP GETGPRRVSQ HEIRAGFTDG
WRVDSVEPAE IEITIGPSAI PSWLATITRL