Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_5437 |
Symbol | |
ID | 5673768 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 6575755 |
End bp | 6579186 |
Gene Length | 3432 bp |
Protein Length | 1143 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 641244292 |
Product | ATPase-like protein |
Protein accession | YP_001509698 |
Protein GI | 158317190 |
COG category | [R] General function prediction only |
COG ID | [COG0433] Predicted ATPase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.384057 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0313008 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGGACG GTTTCCGCTT CCACAGGCTG CTTTCCGCCC CCCGCCCGCC GGACCCGTCG CAGCGGCCCG ACCCGGCGCC AGCCCAGCTG TTCGCCGCGC TCATCGCGGC GCACGCCGAC CTGACGCAGG ACGCAGACGT CGACGCCGCT CCCCACCCGC GTGCCCCGGA CCGGGTTCCC GCGGTGGCGG CCGGCACGGC TGCGGCCAGG GCGCCGGGTA CGGCTGCGGT CGCGGTCGCC TGGATGCGGG TGCCCGGCGA CCCACATCTG CGGATTCTGG TTGGCGGGAA CCCGTACTTC CCGGCGGCGG GCACGGTTGC GTCCGCCGCC GTGGAAGGAG TGACGGTGCC GGTGCTGTAC CCGCCGGGCA GCACCGGCGT TCCGGTCGAC ACGGCCGACC TCGTGGCGGC ACTGGCCGGG TTCCCGTGCT GGCTGCGGTG CGAAGGGACG GCCGACGCAC TCTGGGGCAC AGCCGCCGGC AGCGGTGCCC ACAACGGCAA CGGCAGCGGC AGCGGAGCCC GGCACGGCGA CGGGCCGGCC CGGCACGGCT CCTTCGACGA CTACGCCGCC CACCTGCCCG GCGCCTTCGC CTGGCTGGTA ATCGGGCAGC CGGTGCCCAC CGGGGTCGTC GACACCGAAC GCGGCGACCT GCTACGGATG ATCCCCTTCC TGCGCCAGCG GGAGCGAGAC GAACACGCCC GTCTCGAGCT GGAACGAGCC GAGGCCCGCT ACCGCGAGCT GACCCGTTCG ACAGCGACCG GAATGTGGGA CGTGCGGGTG CTCGTCGGTG CGCCGACGAG CACAGCGGCG CGACTGACCG CCGCGCTGCT GTGCGGCGCC GGAGACCTCG ACGATCTTCC CTATCTCCTC ACCCCGGCGC GGGGCGGGCC GACCTCGTTG GCCGAGGCCC TTGGCCCGAC CACGATGCCC CGGGCCGCCC AGGCGCCGCA GGCCACCCAG GCGCCGCAGG CCATCGGCGC CGGCCCGGGC GGCACGTGGA CGGCTGGCCC GTCAGGTCCC GCCGGGCGTC CCGGGTTCGG GCCCGGCCCC GGAGGACCCG GCCCCGGCCC CGGCCCCGGC CCCGGCCGTG CCGGACCGGG AGGCATCGTC ACGGGGCCGG CGGGCAATCC CGGGACCGGG CGTCCCGGCC CCGCCGTCGG CGGTCCGGCG ACAGCCGGCG TCGACGCGAG CTTTCCGTTC CGTGCGGGCG GGGAGCTCCT CGCCGCGCTC GCGCGCCCGC CCAGGCGCGA ACTCCCGGGG ATCACACTGG TGACCCCGCA CACCTTCGAC GTCACCCCTG AGGGAGTCAT CCAGGCAAGC CGGCCGATGG CACCGGCGGC GACCTTGAAC GGGACGGCGC ACAGGCCCGC CGGCGAGGCG GCGAGCCTCC CCGGGACGGC GACCTGCCTC CCTGGGACGG CGACCGTGCC CGACGGCGGG CTCGCGCTCG GTCAGGTGCT CGACGCGGCC TGGTCGCCGG CGGGCGTCCT GCCCGTGCCG CGCTCGACGC TGAACCGGCA CGGCTTCGTC AGCGGCGCGA CCGGCTCCGG CAAGTCGCAG ACGGTCCGAT CACTGCTCGA GTCGCTGGCG CGGGCGGCGG ACCCGGTGCC GTGGCTGGTG CTGGAACCAG CGAAGGCCGA GTACGCCCGG ATGGCCGGTC GGCTCGCGGG CCACAGCGAA GTCATCGTGA TCAAACCGGG GCGCCTGGAC GCGCCACCGG CGGCCCTCAA CCCGCTGGAA CCGGAACCGG GGTTCCCGCT CCAGAGCCAC ATCGACCTCG TCCGCGCACT GTTCCTGGCC GCGTTCGAGG CGCACGAGCC GTTCCCCCAG GTACTCGCCC GGGCCCTGAC CGTCTGCTAC ACCGACGCCG GCTGGGATCT GGTGGCCGGC CAGATGCGGC CCGAGCACCG GCCGCGGTTC CGCGGCGACG AACCGGCCGT ACCCGTGCGG CCCCGCTATC CGACGCTCGG CGACCTGCAG CGCACCGCCG CCCGGGTCGT CGAGAACATC GGCTACGGCG CCGAGGTGAC CGCGGACGTG CGCGGTTTCG TCGACGTGCG GATCGGCTCG CTGCGGGAGG GGACGCCCGG ACGGTTCTTC GAAGGCGGTC ACCCCCTCGA CGTCGGCGCG CTCCTGACCC GCAACGTGGT CTTCGAGCTC GAGGACATCA CCAACGACCA GGACAAGGCC TTCCTCCTCG GCGCGGTGCT GATCCGCATC GTCGAGCACC TGCGGGTCAA GTACGGCAGC GCGGGGACGG GCGAGCTGCG GCATGTCCTC GTCGTCGAGG AGGCCCACCG GCTGCTCAGG AACGTCGAGA GCGGCCCGGC CGCAGCCGCC GTCGAGCTGT TCGCGTCGCT GCTCGCCGAG ATCCGCGCCT ACGGCGAAGG CGTCCTCGTC GTCGAACAGA TCCCGTCGAA GATCATTCCT GACGTGCTGA AGAACACCGC GCTGAAGGTG ATGCACCGGC TGCCCTCGGC GGAGGACAGA GCGGCCGTCG GCGCCACGAT GAACCTGAGG GAGGAGCAGT CCGAGCTGGT CGTCGCGCTG CCGCCGGGCG TGGCGGCGGT AGCGGTCGAC GGGATGGACC GTCCGGTGCT CGTCCGGATG ACGCCGGGCT CGGATCGGGA GTCGATGGGC GAAGCCAGCT ACGACGGCGC GCCACTCGGC GGACGACGGA GCATCCTGTG CGGCGCGGAC TGCCGGCGTG ACGGCGCCTG CACGCTTCGC CAGATCAACG ACGCGGCTCA CCTGGCTTCC GACCCCCGCC TGGTCGTCTG GGTCGAGACG GTGGCGGCGC ACCAGGTCAT CGGCTTGGCC CATCTGCTCG GCCAGGGGCC ACCGAAACCG GTGGCGCCGC TGTCCGGTGA GCTGCTCGCC CTGCCGACCC GGACCAGGGA CTGCCTGCTC GCGCAGGCGG TGGACCGGGC GGTCGCCGCA CGGGCGACCC TGCTGCGCGG CCACGTCGAT CCGGACGACT TCGCCGGCCG GCTCGCGGGC ACACTCGCCG GACTGCTCGC CGGCGCCGCG CAGGACGACG CTGACACCCG TCGCTGGACC GCCGGCTCGT ACCGCTACCA GGACGTCCGC CGGACCCTGA ACGAGGCCCA GACCGGCCCC AACGCCGGCC GCCCCCACCC GGAGACGCCC GACTGGCGCC GCCGTGGGCT GTCACTGGTG AGCCAGACGG TGCCCGCGCA GTTCGCGGAG CTCCGCGACA GCGCCCACTA CGCCCCCGGC GCGGACGCCG TGAGCCTCGG TGACCTGGCG ACCAGTGGCC TCGCCGTCGC CGTGAAGACG CTTACCGGCG GGACGTCCAA GGAACACCTG CGCGCGGCGC TGCGCCTGGC GTGCGGCGAC GCCGACCTGG AGGCGCTGCA CTTCCAGGTC GCCGACCTGC TGGAGAAGTA CGTCGTGGAC GGAGGGCGCT GA
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Protein sequence | MLDGFRFHRL LSAPRPPDPS QRPDPAPAQL FAALIAAHAD LTQDADVDAA PHPRAPDRVP AVAAGTAAAR APGTAAVAVA WMRVPGDPHL RILVGGNPYF PAAGTVASAA VEGVTVPVLY PPGSTGVPVD TADLVAALAG FPCWLRCEGT ADALWGTAAG SGAHNGNGSG SGARHGDGPA RHGSFDDYAA HLPGAFAWLV IGQPVPTGVV DTERGDLLRM IPFLRQRERD EHARLELERA EARYRELTRS TATGMWDVRV LVGAPTSTAA RLTAALLCGA GDLDDLPYLL TPARGGPTSL AEALGPTTMP RAAQAPQATQ APQAIGAGPG GTWTAGPSGP AGRPGFGPGP GGPGPGPGPG PGRAGPGGIV TGPAGNPGTG RPGPAVGGPA TAGVDASFPF RAGGELLAAL ARPPRRELPG ITLVTPHTFD VTPEGVIQAS RPMAPAATLN GTAHRPAGEA ASLPGTATCL PGTATVPDGG LALGQVLDAA WSPAGVLPVP RSTLNRHGFV SGATGSGKSQ TVRSLLESLA RAADPVPWLV LEPAKAEYAR MAGRLAGHSE VIVIKPGRLD APPAALNPLE PEPGFPLQSH IDLVRALFLA AFEAHEPFPQ VLARALTVCY TDAGWDLVAG QMRPEHRPRF RGDEPAVPVR PRYPTLGDLQ RTAARVVENI GYGAEVTADV RGFVDVRIGS LREGTPGRFF EGGHPLDVGA LLTRNVVFEL EDITNDQDKA FLLGAVLIRI VEHLRVKYGS AGTGELRHVL VVEEAHRLLR NVESGPAAAA VELFASLLAE IRAYGEGVLV VEQIPSKIIP DVLKNTALKV MHRLPSAEDR AAVGATMNLR EEQSELVVAL PPGVAAVAVD GMDRPVLVRM TPGSDRESMG EASYDGAPLG GRRSILCGAD CRRDGACTLR QINDAAHLAS DPRLVVWVET VAAHQVIGLA HLLGQGPPKP VAPLSGELLA LPTRTRDCLL AQAVDRAVAA RATLLRGHVD PDDFAGRLAG TLAGLLAGAA QDDADTRRWT AGSYRYQDVR RTLNEAQTGP NAGRPHPETP DWRRRGLSLV SQTVPAQFAE LRDSAHYAPG ADAVSLGDLA TSGLAVAVKT LTGGTSKEHL RAALRLACGD ADLEALHFQV ADLLEKYVVD GGR
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